RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 GNL3LQ9NVN8 582 aaKnown RBP25.89■■□□□ 1.74
PNKP-201ENST00000322344 NRBP1Q9UHY1 535 aa25.89■■□□□ 1.74
PNKP-201ENST00000322344 BCORQ6W2J9 1755 aa25.89■■□□□ 1.73
PNKP-201ENST00000322344 RANBP6O60518 1105 aaKnown RBP25.88■■□□□ 1.73
PNKP-201ENST00000322344 SLC3A2P08195 630 aaKnown RBP25.88■■□□□ 1.73
PNKP-201ENST00000322344 PFKFB1P16118 471 aa25.88■■□□□ 1.73
PNKP-201ENST00000322344 GTF2F1P35269 517 aaKnown RBP eCLIP25.88■■□□□ 1.737e-8■■■□□ 17.9
PNKP-201ENST00000322344 ZNF804BA4D1E1 1349 aa25.88■■□□□ 1.73
PNKP-201ENST00000322344 CHD4Q14839 1912 aa25.88■■□□□ 1.73
PNKP-201ENST00000322344 RGL2O15211 777 aa25.88■■□□□ 1.73
PNKP-201ENST00000322344 CHAF1AQ13111 956 aaPredicted RBP25.88■■□□□ 1.73
PNKP-201ENST00000322344 INCENPQ9NQS7 918 aa25.88■■□□□ 1.73
PNKP-201ENST00000322344 ERICH2A1L162 156 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 PRKAB2O43741 272 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 WTAPQ15007 396 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 CCDC144CPQ8IYA2 1237 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 AOPEPQ8N6M6 819 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 TACC3Q9Y6A5 838 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 MYH14Q7Z406 1995 aaKnown RBP25.87■■□□□ 1.73
PNKP-201ENST00000322344 ZNF831Q5JPB2 1677 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 FAM237AA0A1B0GTK4 181 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 NLRP12P59046 1061 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 UBE4AQ14139 1066 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 PTPAQ15257 358 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 SF3B3Q15393 1217 aaKnown RBP25.87■■□□□ 1.73
PNKP-201ENST00000322344 MTERF4Q7Z6M4 381 aaKnown RBP25.87■■□□□ 1.73
PNKP-201ENST00000322344 ANKRD18AQ8IVF6 992 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.87■■□□□ 1.73
PNKP-201ENST00000322344 SLC26A6Q9BXS9 759 aa25.87■■□□□ 1.73
PNKP-201ENST00000322344 CCDC196A0A1B0GTZ2 297 aa25.86■■□□□ 1.73
PNKP-201ENST00000322344 WDHD1O75717 1129 aaPredicted RBP25.86■■□□□ 1.73
PNKP-201ENST00000322344 TRIM22Q8IYM9 498 aa25.86■■□□□ 1.73
PNKP-201ENST00000322344 MAP3K14Q99558 947 aa25.86■■□□□ 1.73
PNKP-201ENST00000322344 MYL10Q9BUA6 226 aa25.86■■□□□ 1.73
PNKP-201ENST00000322344 CYP7A1P22680 504 aa25.85■■□□□ 1.73
PNKP-201ENST00000322344 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.85■■□□□ 1.73
PNKP-201ENST00000322344 HPSEQ9Y251 543 aa25.85■■□□□ 1.73
PNKP-201ENST00000322344 COL5A3P25940 1745 aaPredicted RBP25.85■■□□□ 1.73
PNKP-201ENST00000322344 ECM29Q5VYK3 1845 aa25.85■■□□□ 1.73
PNKP-201ENST00000322344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.85■■□□□ 1.73
PNKP-201ENST00000322344 LRMPQ12912 555 aa25.85■■□□□ 1.73
PNKP-201ENST00000322344 RTN1Q16799 776 aa25.85■■□□□ 1.73
PNKP-201ENST00000322344 MARCKSP29966 332 aaPredicted RBP25.84■■□□□ 1.73
PNKP-201ENST00000322344 SYKP43405 635 aa25.84■■□□□ 1.73
PNKP-201ENST00000322344 TPM4P67936 248 aa25.84■■□□□ 1.73
PNKP-201ENST00000322344 SAFBQ15424 915 aaKnown RBP eCLIP25.84■■□□□ 1.73
PNKP-201ENST00000322344 CCDC144BQ3MJ40 725 aa25.84■■□□□ 1.73
PNKP-201ENST00000322344 RRP12Q5JTH9 1297 aaKnown RBP25.84■■□□□ 1.73
PNKP-201ENST00000322344 CACTINQ8WUQ7 758 aaKnown RBP25.84■■□□□ 1.73
PNKP-201ENST00000322344 TOMM22Q9NS69 142 aa25.84■■□□□ 1.73
PNKP-201ENST00000322344 ANAPC4Q9UJX5 808 aa25.84■■□□□ 1.73
PNKP-201ENST00000322344 MROH7-TTC4A0A0A0MT08 1334 aa25.83■■□□□ 1.73
PNKP-201ENST00000322344 CUTAO60888 179 aa25.83■■□□□ 1.73
PNKP-201ENST00000322344 PPARAQ07869 468 aa25.83■■□□□ 1.73
PNKP-201ENST00000322344 MIGA1Q8NAN2 632 aa25.83■■□□□ 1.73
PNKP-201ENST00000322344 ERCC4Q92889 916 aaPredicted RBP25.83■■□□□ 1.73
PNKP-201ENST00000322344 BSDC1Q9NW68 430 aaPredicted RBP25.83■■□□□ 1.73
PNKP-201ENST00000322344 MAGEB6P1A0A0J9YX57 407 aa25.83■■□□□ 1.73
PNKP-201ENST00000322344 A0A087WWV3 80 aa25.82■■□□□ 1.72
PNKP-201ENST00000322344 SMTNL1A8MU46 457 aa25.82■■□□□ 1.72
PNKP-201ENST00000322344 PPP2R5BQ15173 497 aa25.82■■□□□ 1.72
PNKP-201ENST00000322344 DPCR1Q3MIW9 517 aa25.82■■□□□ 1.72
PNKP-201ENST00000322344 FAM13BQ9NYF5 915 aa25.82■■□□□ 1.72
PNKP-201ENST00000322344 RBM10P98175 930 aaKnown RBP25.81■■□□□ 1.72
PNKP-201ENST00000322344 ERFEQ4G0M1 354 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 CAVIN4Q5BKX8 364 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 RESP18Q5W5W9 173 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 NOSTRINQ8IVI9 506 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 LRRC8AQ8IWT6 810 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 DEXIO95424 95 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 MMP1P03956 469 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 RAI14Q9P0K7 980 aa25.81■■□□□ 1.72
PNKP-201ENST00000322344 SHC4Q6S5L8 630 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 ESR2Q92731 530 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 UBAC1Q9BSL1 405 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 TUBE1Q9UJT0 475 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 GSDMDP57764 484 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 FOXP1Q9H334 677 aaPredicted RBP25.8■■□□□ 1.72
PNKP-201ENST00000322344 IMPACTQ9P2X3 320 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 ABCF2Q9UG63 623 aa25.8■■□□□ 1.72
PNKP-201ENST00000322344 DHX8Q14562 1220 aaKnown RBP25.79■■□□□ 1.72
PNKP-201ENST00000322344 SLC10A5Q5PT55 438 aa25.79■■□□□ 1.72
PNKP-201ENST00000322344 ZNF654Q8IZM8 581 aa25.79■■□□□ 1.72
PNKP-201ENST00000322344 CRACR2BQ8N4Y2 399 aaPredicted RBP25.79■■□□□ 1.72
PNKP-201ENST00000322344 IKBKBO14920 756 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 SEMA3EO15041 775 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 GYG1P46976 350 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 NBPF11Q86T75 865 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 ELOA2Q8IYF1 753 aaPredicted RBP25.78■■□□□ 1.72
PNKP-201ENST00000322344 FANCBQ8NB91 859 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 FBXW7Q969H0 707 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 ZKSCAN3Q9BRR0 538 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 CNTNAP4Q9C0A0 1308 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 A0A1B0GUL6 1792 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 PCP11498 1178 aaKnown RBP25.78■■□□□ 1.72
PNKP-201ENST00000322344 ADGRA1Q86SQ6 560 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 KRI1Q8N9T8 703 aaKnown RBP25.78■■□□□ 1.72
PNKP-201ENST00000322344 LINC00116Q8NCU8 138 aa25.78■■□□□ 1.72
PNKP-201ENST00000322344 RIOK1Q9BRS2 568 aaKnown RBP25.78■■□□□ 1.72
PNKP-201ENST00000322344 BRIP1Q9BX63 1249 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms