RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLK1-201ENST00000321356 NHSL1Q5SYE7 1610 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 CBFA2T2O43439 604 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 IDH1O75874 414 aaKnown RBP10.04□□□□□ -0.8
CLK1-201ENST00000321356 KIF20AO95235 890 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 UQCRFS1P1P0C7P4 283 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 RXRAP19793 462 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 FGFR2P21802 821 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
CLK1-201ENST00000321356 PHKA1P46020 1223 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 GABPB1Q06547 395 aaPredicted RBP10.04□□□□□ -0.8
CLK1-201ENST00000321356 PNOCQ13519 176 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 ELF2Q15723 593 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 HLFQ16534 295 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 FBXO38Q6PIJ6 1188 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 MICU3Q86XE3 530 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 PIGBQ92521 554 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
CLK1-201ENST00000321356 CNNM1Q9NRU3 951 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 WWC3Q9ULE0 1092 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 ASAP1Q9ULH1 1129 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
CLK1-201ENST00000321356 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 PHLPP2Q6ZVD8 1323 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 GOLGA8AA7E2F4 631 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 CCP110O43303 1012 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
CLK1-201ENST00000321356 IFNAR1P17181 557 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 UBASH3AP57075 661 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 ETF1P62495 437 aaKnown RBP10.03□□□□□ -0.8
CLK1-201ENST00000321356 MDM2Q00987 491 aaPredicted RBP10.03□□□□□ -0.8
CLK1-201ENST00000321356 LONRF3Q496Y0 759 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 SYT10Q6XYQ8 523 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 FOXP4Q8IVH2 680 aaPredicted RBP10.03□□□□□ -0.8
CLK1-201ENST00000321356 VSTM4Q8IW00 320 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 DPF2Q92785 391 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 CLIC6Q96NY7 704 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
CLK1-201ENST00000321356 PATL2C9JE40 543 aaKnown RBP10.02□□□□□ -0.8
CLK1-201ENST00000321356 IRS4O14654 1257 aaPredicted RBP10.02□□□□□ -0.8
CLK1-201ENST00000321356 APPP05067 770 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 H2AFXP16104 143 aaPredicted RBP10.02□□□□□ -0.8
CLK1-201ENST00000321356 KCNA4P22459 653 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 GPTP24298 496 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 TRIM29Q14134 588 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 TMEM67Q5HYA8 995 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 ISM2Q6H9L7 571 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 NOSTRINQ8IVI9 506 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.02□□□□□ -0.8
CLK1-201ENST00000321356 KCNH3Q9ULD8 1083 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 TACC3Q9Y6A5 838 aa10.02□□□□□ -0.8
CLK1-201ENST00000321356 V9GYY5 206 aaPredicted RBP10.02□□□□□ -0.8
CLK1-201ENST00000321356 PDE8AO60658 829 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 CYP19A1P11511 503 aaPredicted RBP10.02□□□□□ -0.81
CLK1-201ENST00000321356 BMP6P22004 513 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 GNL2Q13823 731 aaKnown RBP10.02□□□□□ -0.81
CLK1-201ENST00000321356 PUM3Q15397 648 aaKnown RBP10.02□□□□□ -0.81
CLK1-201ENST00000321356 NT5DC1Q5TFE4 455 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 TRIM65Q6PJ69 517 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 TMEM139Q8IV31 216 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 IFNL3Q8IZI9 196 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 STK11IPQ8N1F8 1099 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 KRI1Q8N9T8 703 aaKnown RBP10.02□□□□□ -0.81
CLK1-201ENST00000321356 LPIN2Q92539 896 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 AIDAQ96BJ3 306 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 CNNM2Q9H8M5 875 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 INTS13Q9NVM9 706 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 ZSWIM5Q9P217 1185 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 ZHX1Q9UKY1 873 aaPredicted RBP10.02□□□□□ -0.81
CLK1-201ENST00000321356 PCDHA5Q9Y5H7 936 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.02□□□□□ -0.812e-27■■■■■ 27.1
CLK1-201ENST00000321356 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.81
CLK1-201ENST00000321356 SLIT2O94813 1529 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 MROH5Q6ZUA9 1318 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 UBE2Q2LH0YL09 131 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 SERPINC1P01008 464 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 MMP1P03956 469 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 PTPREP23469 700 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 TOB1P50616 345 aaPredicted RBP10.01□□□□□ -0.81
CLK1-201ENST00000321356 PDE4BQ07343 736 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 SSRP1Q08945 709 aaKnown RBP10.01□□□□□ -0.81
CLK1-201ENST00000321356 TBX2Q13207 712 aaPredicted RBP10.01□□□□□ -0.81
CLK1-201ENST00000321356 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 NFXL1Q6ZNB6 911 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 KRT222Q8N1A0 295 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 CNNM3Q8NE01 707 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 WASF1Q92558 559 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 SLC4A9Q96Q91 983 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 MTA3Q9BTC8 594 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 MYL10Q9BUA6 226 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 SLC26A6Q9BXS9 759 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 FANCLQ9NW38 375 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 ZNF446Q9NWS9 450 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 FBXO2Q9UK22 296 aaPredicted RBP10.01□□□□□ -0.81
CLK1-201ENST00000321356 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
CLK1-201ENST00000321356 COL22A1Q8NFW1 1626 aaPredicted RBP10.01□□□□□ -0.81
CLK1-201ENST00000321356 BCL9O00512 1426 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms