RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 CCAR2Q8N163 923 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 FMN2Q9NZ56 1722 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 TNKSO95271 1327 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 PFKFB2O60825 505 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 BBOX1O75936 387 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 PRDX5P30044 214 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 BTDP43251 543 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 KRT40Q6A162 431 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 DIS3L2Q8IYB7 885 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 ZNF654Q8IZM8 581 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 PLA2G12BQ9BX93 195 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 INCENPQ9NQS7 918 aa10.69□□□□□ -0.7
TMEM39A-201ENST00000319172 UBA7P41226 1012 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 CUL4AQ13619 759 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 CFAP100Q494V2 611 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 TRMT1LQ7Z2T5 733 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 ZNF274Q96GC6 653 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 GPCPD1Q9NPB8 672 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 USP40Q9NVE5 1235 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 DACH1Q9UI36 760 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 AFMP43652 599 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 FILIP1LQ4L180 1135 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 GJA3Q9Y6H8 435 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 IPO7O95373 1038 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 BRAPQ7Z569 592 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 NTSR2O95665 410 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 ANO6Q4KMQ2 910 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 LEO1Q8WVC0 666 aaPredicted RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 DNAJC25Q9H1X3 360 aa10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-201ENST00000319172 DEXIO95424 95 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 MECOMQ03112 1051 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 STIM1Q13586 685 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 MAGEC2Q9UBF1 373 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 KRT2P35908 639 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 HSP90AA4PQ58FG1 418 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 CCDC148Q8NFR7 591 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 ARPP21Q9UBL0 812 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 ADCY5O95622 1261 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 PARP1P09874 1014 aaKnown RBP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 MCM7P33993 719 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 BMP2KQ9NSY1 1161 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 VPS54Q9P1Q0 977 aa10.67□□□□□ -0.7
TMEM39A-201ENST00000319172 ZNF174Q15697 407 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 STX1AQ16623 288 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 PTF1AQ7RTS3 328 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 TEKT1Q969V4 418 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 TCP11L1Q9NUJ3 509 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 NFAT5O94916 1531 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 USP42Q9H9J4 1324 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 SMTNL1A8MU46 457 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 SEMA3EO15041 775 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 SPECC1Q5M775 1068 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 RRP36Q96EU6 259 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 ZSCAN10Q96SZ4 725 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 RBM28Q9NW13 759 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 ADRA2BP18089 450 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 TNNI2P48788 182 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 CNKSR1Q969H4 720 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 PEAK1Q9H792 1746 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 CARMIL3Q8ND23 1372 aa10.66□□□□□ -0.7
TMEM39A-201ENST00000319172 USP17L8P0C7I0 530 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 IDEP14735 1019 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 EPS15P42566 896 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 EN1Q05925 392 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 ANO1Q5XXA6 986 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 CUL5Q93034 780 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 DHX58Q96C10 678 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 TAF6LQ9Y6J9 622 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 BCL9O00512 1426 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 XRN1Q8IZH2 1706 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 CALML3P27482 149 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 TYRO3Q06418 890 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 ZYXQ15942 572 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 TMEM266Q2M3C6 531 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 FAM84BQ96KN1 310 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 KIF1AQ12756 1690 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 NSUN7Q8NE18 718 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 SMARCE1Q969G3 411 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 USP28Q96RU2 1077 aa10.65□□□□□ -0.7
TMEM39A-201ENST00000319172 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.71
TMEM39A-201ENST00000319172 PIK3AP1Q6ZUJ8 805 aa10.65□□□□□ -0.71
TMEM39A-201ENST00000319172 ATF5Q9Y2D1 282 aaPredicted RBP10.65□□□□□ -0.71
TMEM39A-201ENST00000319172 MED23Q9ULK4 1368 aa10.64□□□□□ -0.71
TMEM39A-201ENST00000319172 GOLGA8HP0CJ92 632 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms