RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 IGDCC4Q8TDY8 1250 aa26.89■■□□□ 1.9
PTX3-201ENST00000295927 MXD3Q9BW11 206 aa26.89■■□□□ 1.9
PTX3-201ENST00000295927 ARPP21Q9UBL0 812 aaPredicted RBP26.89■■□□□ 1.9
PTX3-201ENST00000295927 GAKO14976 1311 aa26.89■■□□□ 1.9
PTX3-201ENST00000295927 STX6O43752 255 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 POLD1P28340 1107 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 USP5P45974 858 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 SBK1Q52WX2 424 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 UPF1Q92900 1129 aaKnown RBP eCLIP26.88■■□□□ 1.89
PTX3-201ENST00000295927 MKRN1Q9UHC7 482 aaKnown RBP26.88■■□□□ 1.89
PTX3-201ENST00000295927 NAV1Q8NEY1 1877 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 SCN9AQ15858 1988 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 DDX11L8A8MPP1 907 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 ECE2O60344 883 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 AOC3Q16853 763 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 SUPT20HQ8NEM7 779 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 LLPHQ9BRT6 129 aaKnown RBP26.88■■□□□ 1.89
PTX3-201ENST00000295927 KCNQ5Q9NR82 932 aa26.88■■□□□ 1.89
PTX3-201ENST00000295927 JAK2O60674 1132 aa26.87■■□□□ 1.89
PTX3-201ENST00000295927 NCOA5Q9HCD5 579 aaKnown RBP26.87■■□□□ 1.89
PTX3-201ENST00000295927 MCM9Q9NXL9 1143 aa26.87■■□□□ 1.89
PTX3-201ENST00000295927 ZNF646O15015 1829 aaPredicted RBP26.87■■□□□ 1.89
PTX3-201ENST00000295927 KIAA2012Q0VF49 1180 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 GRIPAP1Q4V328 841 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 CCDC93Q567U6 631 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 TMEM67Q5HYA8 995 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 F8W031 263 aaPredicted RBP26.86■■□□□ 1.89
PTX3-201ENST00000295927 FGRP09769 529 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 CYP2D6P10635 497 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 EVX2Q03828 476 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 TGFBRAP1Q8WUH2 860 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 LY9Q9HBG7 655 aa26.86■■□□□ 1.89
PTX3-201ENST00000295927 GOLGA8BA8MQT2 603 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 IFIT3O14879 490 aaKnown RBP26.85■■□□□ 1.89
PTX3-201ENST00000295927 CTDNEP1O95476 244 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 USP17L8P0C7I0 530 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 ZSCAN22P10073 491 aaPredicted RBP26.85■■□□□ 1.89
PTX3-201ENST00000295927 PCP11498 1178 aaKnown RBP26.85■■□□□ 1.89
PTX3-201ENST00000295927 PLCG2P16885 1265 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 NSUN7Q8NE18 718 aaKnown RBP26.85■■□□□ 1.89
PTX3-201ENST00000295927 SMARCC2Q8TAQ2 1214 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 SENP2Q9HC62 589 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 TTF2Q9UNY4 1162 aaKnown RBP26.85■■□□□ 1.89
PTX3-201ENST00000295927 HPS5Q9UPZ3 1129 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 DAGLAQ9Y4D2 1042 aa26.85■■□□□ 1.89
PTX3-201ENST00000295927 TGFB2P61812 414 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 LARP1BQ659C4 914 aaKnown RBP26.84■■□□□ 1.89
PTX3-201ENST00000295927 RTKN2Q8IZC4 609 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 ESR2Q92731 530 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 CHMP4CQ96CF2 233 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 RHBDL3P58872 404 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 STRIP1Q5VSL9 837 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 TEX11Q8IYF3 940 aa26.84■■□□□ 1.89
PTX3-201ENST00000295927 PDCP20941 246 aa26.83■■□□□ 1.89
PTX3-201ENST00000295927 LIFRP42702 1097 aa26.83■■□□□ 1.89
PTX3-201ENST00000295927 SGMS1Q86VZ5 419 aa26.83■■□□□ 1.89
PTX3-201ENST00000295927 ZKSCAN3Q9BRR0 538 aa26.83■■□□□ 1.89
PTX3-201ENST00000295927 MTA3Q9BTC8 594 aa26.83■■□□□ 1.89
PTX3-201ENST00000295927 MTMR6Q9Y217 621 aa26.83■■□□□ 1.89
PTX3-201ENST00000295927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.83■■□□□ 1.89
PTX3-201ENST00000295927 PPIP5K2O43314 1243 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 C12orf60Q5U649 245 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 RAB11FIP4Q86YS3 637 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 FOCADQ5VW36 1801 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 ADAMTSL1Q8N6G6 1762 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 PRDM1O75626 825 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 SLC3A2P08195 630 aaKnown RBP26.82■■□□□ 1.88
PTX3-201ENST00000295927 FKBP1AP62942 108 aaKnown RBP26.82■■□□□ 1.88
PTX3-201ENST00000295927 SART3Q15020 963 aaKnown RBP26.82■■□□□ 1.88
PTX3-201ENST00000295927 DACT2Q5SW24 774 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 MCTP1Q6DN14 999 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 MAPKAPK5Q8IW41 473 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 DDX11Q96FC9 970 aa26.82■■□□□ 1.88
PTX3-201ENST00000295927 PTPDC1A2A3K4 754 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 PDIA4P13667 645 aaKnown RBP26.81■■□□□ 1.88
PTX3-201ENST00000295927 SLC4A8Q2Y0W8 1093 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 APOA5Q6Q788 366 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 NFXL1Q6ZNB6 911 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 CHAMP1Q96JM3 812 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 PSMD1Q99460 953 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 PIM2Q9P1W9 311 aa26.81■■□□□ 1.88
PTX3-201ENST00000295927 DDX60LQ5H9U9 1706 aaKnown RBP26.81■■□□□ 1.88
PTX3-201ENST00000295927 USP17L3A6NCW0 530 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 USP17L4A6NCW7 530 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 GOLGA6L22H0YM25 854 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 ORC4O43929 436 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 SCNN1DP51172 638 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 USP17L1Q7RTZ2 530 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 MYH1P12882 1939 aa26.8■■□□□ 1.88
PTX3-201ENST00000295927 VPS37CA5D8V6 355 aaPredicted RBP26.8■■□□□ 1.88
PTX3-201ENST00000295927 RANBP6O60518 1105 aaKnown RBP26.8■■□□□ 1.88
PTX3-201ENST00000295927 HMGN5P82970 282 aaKnown RBP26.8■■□□□ 1.88
PTX3-201ENST00000295927 BRCA1P38398 1863 aaKnown RBP26.79■■□□□ 1.88
PTX3-201ENST00000295927 ERICH2A1L162 156 aa26.79■■□□□ 1.88
PTX3-201ENST00000295927 DHX16O60231 1041 aaKnown RBP26.79■■□□□ 1.88
PTX3-201ENST00000295927 F13A1P00488 732 aa26.79■■□□□ 1.88
PTX3-201ENST00000295927 WTAPQ15007 396 aa26.79■■□□□ 1.88
PTX3-201ENST00000295927 AMOTL1Q8IY63 956 aa26.79■■□□□ 1.88
PTX3-201ENST00000295927 UBAC1Q9BSL1 405 aa26.79■■□□□ 1.88
PTX3-201ENST00000295927 CCDC69A6NI79 296 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms