RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
CNOT9-202ENST00000295701 ERO1AQ96HE7 468 aa11.71□□□□□ -0.53
CNOT9-202ENST00000295701 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 UTYO14607 1347 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 EN2P19622 333 aaPredicted RBP11.7□□□□□ -0.54
CNOT9-202ENST00000295701 BCAMP50895 628 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 SP3Q02447 781 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 VGLL4Q14135 290 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 ADAM33Q9BZ11 813 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 EFCC1Q9HA90 598 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
CNOT9-202ENST00000295701 CCL15-CCL14A0A0B4J2E2 113 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 DPYSL4O14531 572 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 CCL15Q16663 113 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 RABL6Q3YEC7 729 aaPredicted RBP11.69□□□□□ -0.54
CNOT9-202ENST00000295701 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 VPS37DQ86XT2 251 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
CNOT9-202ENST00000295701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.69□□□□□ -0.54
CNOT9-202ENST00000295701 MROH5Q6ZUA9 1318 aa11.68□□□□□ -0.54
CNOT9-202ENST00000295701 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
CNOT9-202ENST00000295701 PDE8BO95263 885 aa11.68□□□□□ -0.54
CNOT9-202ENST00000295701 TAF1CQ15572 869 aaPredicted RBP11.68□□□□□ -0.54
CNOT9-202ENST00000295701 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
CNOT9-202ENST00000295701 SLC4A5Q9BY07 1137 aa11.68□□□□□ -0.54
CNOT9-202ENST00000295701 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
CNOT9-202ENST00000295701 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
CNOT9-202ENST00000295701 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
CNOT9-202ENST00000295701 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 TNNI2P48788 182 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
CNOT9-202ENST00000295701 APOBEC3HQ6NTF7 200 aaKnown RBP11.67□□□□□ -0.54
CNOT9-202ENST00000295701 ARMC5Q96C12 935 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 USP44Q9H0E7 712 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 SNCAIPQ9Y6H5 919 aa11.67□□□□□ -0.54
CNOT9-202ENST00000295701 BTBD19C9JJ37 291 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
CNOT9-202ENST00000295701 FGFR2P21802 821 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 GTF2A2P52657 109 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 SSH1Q8WYL5 1049 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 TEKT1Q969V4 418 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 ZFYVE28Q9HCC9 887 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 CSADQ9Y600 493 aa11.66□□□□□ -0.54
CNOT9-202ENST00000295701 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 IRF6O14896 467 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 INPP5BP32019 993 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
CNOT9-202ENST00000295701 HDLBPQ00341 1268 aaKnown RBP11.65□□□□□ -0.54
CNOT9-202ENST00000295701 TBC1D22AQ8WUA7 517 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 WRNIP1Q96S55 665 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 ZBED2Q9BTP6 218 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
CNOT9-202ENST00000295701 CTGFP29279 349 aa11.64□□□□□ -0.55
CNOT9-202ENST00000295701 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
CNOT9-202ENST00000295701 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
CNOT9-202ENST00000295701 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
CNOT9-202ENST00000295701 MRIQ9BWK5 157 aa11.64□□□□□ -0.55
CNOT9-202ENST00000295701 TLR2O60603 784 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
CNOT9-202ENST00000295701 TCP10Q12799 353 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
CNOT9-202ENST00000295701 DIXDC1Q155Q3 683 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 SLC9C1Q4G0N8 1177 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 HABP4Q5JVS0 413 aaKnown RBP11.63□□□□□ -0.55
CNOT9-202ENST00000295701 ATG9AQ7Z3C6 839 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 FAM83AQ86UY5 434 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 ERO1BQ86YB8 467 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 ZFPM1Q8IX07 1006 aa11.63□□□□□ -0.55
CNOT9-202ENST00000295701 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 EYA2O00167 538 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 SLURP2P0DP57 97 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 CETPP11597 493 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 NFIAQ12857 509 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 PPIL2Q13356 520 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 FKBP1CQ5VVH2 108 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 CDC42EP5Q6NZY7 148 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 HHIPL2Q6UWX4 724 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.62□□□□□ -0.55
CNOT9-202ENST00000295701 KCTD12Q96CX2 325 aaKnown RBP11.62□□□□□ -0.55
CNOT9-202ENST00000295701 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 SIL1Q9H173 461 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 TMOD2Q9NZR1 351 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 DAGLAQ9Y4D2 1042 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 DOCK3Q8IZD9 2030 aa11.62□□□□□ -0.55
CNOT9-202ENST00000295701 PTPRCP08575 1304 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 CEP290O15078 2479 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 SLC5A1P13866 664 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 PRDX5P30044 214 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
CNOT9-202ENST00000295701 SLFN5Q08AF3 891 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 SNAPC2Q13487 334 aa11.61□□□□□ -0.55
CNOT9-202ENST00000295701 SLC4A8Q2Y0W8 1093 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms