RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RC3H1Q5TC82 1133 aaKnown RBP23.21■■□□□ 1.31
CXCL16-201ENST00000293778 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
CXCL16-201ENST00000293778 NYXQ9GZU5 481 aa23.21■■□□□ 1.31
CXCL16-201ENST00000293778 STK36Q9NRP7 1315 aa23.2■■□□□ 1.31
CXCL16-201ENST00000293778 NDUFA8P51970 172 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 PPARAQ07869 468 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 TRIM29Q14134 588 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 R3HCC1Q9Y3T6 440 aaKnown RBP23.2■■□□□ 1.3
CXCL16-201ENST00000293778 NID2Q14112 1375 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 RPS6KA4O75676 772 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 TPM2P07951 284 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 SSRP1Q08945 709 aaKnown RBP23.2■■□□□ 1.3
CXCL16-201ENST00000293778 GNL2Q13823 731 aaKnown RBP23.2■■□□□ 1.3
CXCL16-201ENST00000293778 WTAPQ15007 396 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 C11orf57Q6ZUT1 292 aaPredicted RBP23.2■■□□□ 1.3
CXCL16-201ENST00000293778 STK11IPQ8N1F8 1099 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 ZKSCAN3Q9BRR0 538 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 MTA3Q9BTC8 594 aa23.2■■□□□ 1.3
CXCL16-201ENST00000293778 ECM29Q5VYK3 1845 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.19■■□□□ 1.3
CXCL16-201ENST00000293778 ERICH2A1L162 156 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 SDR42E1Q8WUS8 393 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 FAM84BQ96KN1 310 aaPredicted RBP23.19■■□□□ 1.3
CXCL16-201ENST00000293778 SETDB2Q96T68 719 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 SLC26A6Q9BXS9 759 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 TRIM5Q9C035 493 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 SRP68Q9UHB9 627 aaKnown RBP23.19■■□□□ 1.3
CXCL16-201ENST00000293778 TAOK2Q9UL54 1235 aa23.19■■□□□ 1.3
CXCL16-201ENST00000293778 ZNF75DP51815 510 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 TERF1P54274 439 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 IQCB1Q15051 598 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 SDF4Q9BRK5 362 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 ANO10Q9NW15 660 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
CXCL16-201ENST00000293778 IFNAR1P17181 557 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 SLC39A14Q15043 492 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 PLA2G4DQ86XP0 818 aa23.18■■□□□ 1.3
CXCL16-201ENST00000293778 MINDY4BA8MYZ0 360 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 GOLGA6L19H0YKK7 550 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 NBPF5PQ86XG9 351 aaPredicted RBP23.17■■□□□ 1.3
CXCL16-201ENST00000293778 TMTC2Q8N394 836 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 NLRP3Q96P20 1036 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 RIOK1Q9BRS2 568 aaKnown RBP23.17■■□□□ 1.3
CXCL16-201ENST00000293778 GNPATO15228 680 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 ZPR1O75312 459 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 RPS8P62241 208 aaKnown RBP23.17■■□□□ 1.3
CXCL16-201ENST00000293778 WASF1Q92558 559 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 ANAPC4Q9UJX5 808 aa23.17■■□□□ 1.3
CXCL16-201ENST00000293778 NOLC1Q14978 699 aaKnown RBP eCLIP23.16■■□□□ 1.3
CXCL16-201ENST00000293778 RTN1Q16799 776 aa23.16■■□□□ 1.3
CXCL16-201ENST00000293778 AXDND1Q5T1B0 1012 aaPredicted RBP23.16■■□□□ 1.3
CXCL16-201ENST00000293778 KCNF1Q9H3M0 494 aa23.16■■□□□ 1.3
CXCL16-201ENST00000293778 CACNA1SQ13698 1873 aa23.16■■□□□ 1.3
CXCL16-201ENST00000293778 CMA1P23946 247 aa23.16■■□□□ 1.3
CXCL16-201ENST00000293778 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.3
CXCL16-201ENST00000293778 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.16■■□□□ 1.3
CXCL16-201ENST00000293778 UBAC1Q9BSL1 405 aa23.16■■□□□ 1.3
CXCL16-201ENST00000293778 BTAF1O14981 1849 aa23.15■■□□□ 1.3
CXCL16-201ENST00000293778 SEMA3EO15041 775 aa23.15■■□□□ 1.3
CXCL16-201ENST00000293778 FBXO33Q7Z6M2 555 aa23.15■■□□□ 1.3
CXCL16-201ENST00000293778 UBE2Q2LH0YL09 131 aa23.14■■□□□ 1.3
CXCL16-201ENST00000293778 DRC7Q8IY82 874 aa23.14■■□□□ 1.3
CXCL16-201ENST00000293778 TRIM22Q8IYM9 498 aa23.14■■□□□ 1.3
CXCL16-201ENST00000293778 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.3
CXCL16-201ENST00000293778 ESR2Q92731 530 aa23.14■■□□□ 1.3
CXCL16-201ENST00000293778 ERCC4Q92889 916 aaPredicted RBP23.14■■□□□ 1.3
CXCL16-201ENST00000293778 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.3
CXCL16-201ENST00000293778 CCNL1Q9UK58 526 aaPredicted RBP23.14■■□□□ 1.3
CXCL16-201ENST00000293778 COL24A1Q17RW2 1714 aa23.14■■□□□ 1.3
CXCL16-201ENST00000293778 MARCKSP29966 332 aaPredicted RBP23.14■■□□□ 1.29
CXCL16-201ENST00000293778 RCAN1P53805 252 aa23.14■■□□□ 1.29
CXCL16-201ENST00000293778 DYNLL1P63167 89 aaKnown RBP23.14■■□□□ 1.29
CXCL16-201ENST00000293778 CEP57L1Q8IYX8 460 aa23.14■■□□□ 1.29
CXCL16-201ENST00000293778 A0A087WWV3 80 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 CCDC196A0A1B0GTZ2 297 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 WDHD1O75717 1129 aaPredicted RBP23.13■■□□□ 1.29
CXCL16-201ENST00000293778 PFKFB1P16118 471 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 KLRK1P26718 216 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 TPTE2Q6XPS3 522 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 C17orf53Q8N3J3 647 aaPredicted RBP23.13■■□□□ 1.29
CXCL16-201ENST00000293778 JMYQ8N9B5 988 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 ANKRD2Q9GZV1 360 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 BECN2A8MW95 431 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 UBAP1LF5GYI3 381 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 PPP6R2O75170 966 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 ZNF202O95125 648 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 PTGS1P23219 599 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 PTPAQ15257 358 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 ZNF654Q8IZM8 581 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 ZNF384Q8TF68 577 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 BRIP1Q9BX63 1249 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 KIAA1468Q9P260 1216 aa23.13■■□□□ 1.29
CXCL16-201ENST00000293778 RTCBQ9Y3I0 505 aaKnown RBP23.13■■□□□ 1.29
CXCL16-201ENST00000293778 SARM1Q6SZW1 724 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 MAP3K14Q99558 947 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 NAT10Q9H0A0 1025 aaKnown RBP23.12■■□□□ 1.29
CXCL16-201ENST00000293778 SPTLC3Q9NUV7 552 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 MROH7-TTC4A0A0A0MT08 1334 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 GUCY1A2P33402 732 aa23.12■■□□□ 1.29
CXCL16-201ENST00000293778 DHX40Q8IX18 779 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms