RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TUBB4AP04350 444 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 GTF2IP78347 998 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 GRAPQ13588 217 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 DCTPP1Q9H773 170 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 GOLGA6L10A0A0M3HER8 536 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 UBE4AQ14139 1066 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 SPA17Q15506 151 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 EZH2Q15910 746 aaKnown RBP12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 CCDC113Q9H0I3 377 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 CTAGE15A4D2H0 777 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 CTAGE8P0CG41 777 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 UBASH3AP57075 661 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 CTAGE6Q86UF2 777 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 CTAGE4Q8IX94 777 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 AOPEPQ8N6M6 819 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 PRM3Q9NNZ6 103 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 CCDC175P0C221 793 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 NBPF11Q86T75 865 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 TMTC2Q8N394 836 aa12.94□□□□□ -0.34
NPC1L1-201ENST00000289547 ZNF804BA4D1E1 1349 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 DNA2P51530 1060 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 C8orf76Q96K31 380 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 SYT1P21579 422 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 HSPA4P34932 840 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 LMBRD1Q9NUN5 540 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 PDE1AP54750 535 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 MFSD14BQ5SR56 506 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 ZNF526Q8TF50 670 aaPredicted RBP12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 STX8Q9UNK0 236 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 EZRP15311 586 aaKnown RBP12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 CHRNDQ07001 517 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 DCAF15Q66K64 600 aa12.93□□□□□ -0.34
NPC1L1-201ENST00000289547 EVCP57679 992 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 SEPT7Q16181 437 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 CNNM3Q8NE01 707 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 SLC4A8Q2Y0W8 1093 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 TMEM67Q5HYA8 995 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 TTF2Q9UNY4 1162 aaKnown RBP12.92□□□□□ -0.34
NPC1L1-201ENST00000289547 MATR3P43243 847 aaKnown RBP eCLIP12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 TIMM10P62072 90 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 HLTFQ14527 1009 aaKnown RBP eCLIP12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 SPATA5Q8NB90 893 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 GNAQP50148 359 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 MIGA1Q8NAN2 632 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 CSADQ9Y600 493 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 SEMA3EO15041 775 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 GOLGA8AA7E2F4 631 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 GOLGA8BA8MQT2 603 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
NPC1L1-201ENST00000289547 YEATS4O95619 227 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 ANAPC15P60006 121 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 HSP90AA4PQ58FG1 418 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 MAATS1Q7Z4T9 603 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 ANKRD62A6NC57 917 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 SUSD4Q5VX71 490 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 CIAPIN1Q6FI81 312 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 ESYT1Q9BSJ8 1104 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 GREM2Q9H772 168 aa12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 PUF60Q9UHX1 559 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-201ENST00000289547 CIAO1O76071 339 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 CEP112Q8N8E3 955 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 JADE2Q9NQC1 790 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 PPP1R12BO60237 982 aaPredicted RBP12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 WTAPQ15007 396 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 INTS4Q96HW7 963 aaKnown RBP12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 C21orf2O43822 256 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 HSF2BPO75031 334 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 HAND2P61296 217 aa12.89□□□□□ -0.35
NPC1L1-201ENST00000289547 IFIT1BQ5T764 474 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms