RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 CCDC178Q5BJE1 867 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 GRAMD1CQ8IYS0 662 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 GOPCQ9HD26 462 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 SMIM23A6NLE4 172 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 ZBTB43O43298 467 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
KCTD3-201ENST00000259154 KCNJ14Q9UNX9 436 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 FRMD3A2A2Y4 597 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 IDEP14735 1019 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 ATP1A2P50993 1020 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
KCTD3-201ENST00000259154 TTC14Q96N46 770 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 AKR1B15C9JRZ8 316 aaPredicted RBP16.87■□□□□ 0.29
KCTD3-201ENST00000259154 AKR1B10O60218 316 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
KCTD3-201ENST00000259154 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 STIM1Q13586 685 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 TMOD3Q9NYL9 352 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 KCNH3Q9ULD8 1083 aa16.87■□□□□ 0.29
KCTD3-201ENST00000259154 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 PDE6BP35913 854 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 CEP112Q8N8E3 955 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 NDUFAB1O14561 156 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 TRIM47Q96LD4 638 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 SAMM50Q9Y512 469 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 B4E1Z4 1266 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 ARHGAP6O43182 974 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 AFAP1L1Q8TED9 768 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 CDK5RAP3Q96JB5 506 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 ADAM21Q9UKJ8 722 aa16.86■□□□□ 0.29
KCTD3-201ENST00000259154 PIP4K2BP78356 416 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 ANKRD7Q92527 254 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 TMEM232C9JQI7 657 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 CCT5P48643 541 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 UBXN1Q04323 297 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
KCTD3-201ENST00000259154 SMYD4Q8IYR2 804 aaPredicted RBP16.85■□□□□ 0.29
KCTD3-201ENST00000259154 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 STRCP1A6NGW2 1772 aa16.85■□□□□ 0.29
KCTD3-201ENST00000259154 PRPF4BQ13523 1007 aaKnown RBP16.85■□□□□ 0.29
KCTD3-201ENST00000259154 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 NLRP12P59046 1061 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 LRRN4CLQ8ND94 238 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 TAB2Q9NYJ8 693 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 CYP21A2P08686 494 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 FAM76AQ8TAV0 307 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 TMEM51Q9NW97 253 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 MORC2Q9Y6X9 1032 aaPredicted RBP16.84■□□□□ 0.29
KCTD3-201ENST00000259154 ATP2B2Q01814 1243 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 GOLPH3LQ9H4A5 285 aa16.84■□□□□ 0.29
KCTD3-201ENST00000259154 TMCO5BA8MYB1 307 aa16.83■□□□□ 0.29
KCTD3-201ENST00000259154 KCTD16Q68DU8 428 aa16.83■□□□□ 0.29
KCTD3-201ENST00000259154 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.29
KCTD3-201ENST00000259154 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.28
KCTD3-201ENST00000259154 KRT9P35527 623 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 IFFO1Q0D2I5 559 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 MYSM1Q5VVJ2 828 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 LDHAL6AQ6ZMR3 332 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 FAM204AQ9H8W3 233 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 PCDHA5Q9Y5H7 936 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 GBP2P32456 591 aaPredicted RBP16.83■□□□□ 0.28
KCTD3-201ENST00000259154 PDIA6Q15084 440 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 SND1Q7KZF4 910 aaKnown RBP eCLIP16.83■□□□□ 0.28
KCTD3-201ENST00000259154 ARHGEF25Q86VW2 580 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
KCTD3-201ENST00000259154 TRPM3Q9HCF6 1732 aaPredicted RBP16.83■□□□□ 0.28
KCTD3-201ENST00000259154 LTN1O94822 1766 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 SPTY2D1Q68D10 685 aaPredicted RBP16.82■□□□□ 0.28
KCTD3-201ENST00000259154 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
KCTD3-201ENST00000259154 GPR161Q8N6U8 529 aaKnown RBP16.82■□□□□ 0.28
KCTD3-201ENST00000259154 MPHOSPH8Q99549 860 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 BLZF1Q9H2G9 400 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 EFCAB8A8MWE9 144 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
KCTD3-201ENST00000259154 NOP2P46087 812 aaKnown RBP16.82■□□□□ 0.28
KCTD3-201ENST00000259154 GBP6Q6ZN66 633 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
KCTD3-201ENST00000259154 VWA3AA6NCI4 1184 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 GOLGA6CA6NDK9 693 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 GOLGA6DP0CG33 693 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 ZNF174Q15697 407 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 GOLGA6AQ9NYA3 693 aa16.82■□□□□ 0.28
KCTD3-201ENST00000259154 ANKARQ7Z5J8 1434 aa16.81■□□□□ 0.28
KCTD3-201ENST00000259154 TLDC2A0PJX2 215 aa16.81■□□□□ 0.28
KCTD3-201ENST00000259154 INPP5BP32019 993 aa16.81■□□□□ 0.28
KCTD3-201ENST00000259154 NLRP5P59047 1200 aa16.81■□□□□ 0.28
KCTD3-201ENST00000259154 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
KCTD3-201ENST00000259154 MIGA1Q8NAN2 632 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms