RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.82□□□□□ -0.2
SEC61A1-201ENST00000243253 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 TMEM232C9JQI7 657 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 GPAA1O43292 621 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 TUBB4AP04350 444 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 ADD2P35612 726 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 PLA2G4AP47712 749 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 CLCN6P51797 869 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 MYH13Q9UKX3 1938 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 ADAMTS2O95450 1211 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 TOB1P50616 345 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 STK38Q15208 465 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 LAMB2P55268 1798 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 COL4A1P02462 1669 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 ETF1P62495 437 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-201ENST00000243253 PNOCQ13519 176 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 LONRF3Q496Y0 759 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 APTXQ7Z2E3 356 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 SPATA20Q8TB22 786 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 NUTM2AQ8IVF1 878 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
SEC61A1-201ENST00000243253 TADA3O75528 432 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 LMOD1P29536 600 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 TCIRG1Q13488 830 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 SFPQP23246 707 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 KRT40Q6A162 431 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 CLIC6Q96NY7 704 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 ZKSCAN3Q9BRR0 538 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 ANGEL1Q9UNK9 670 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 FOXN1O15353 648 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 FCHSD1Q86WN1 690 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 FAM177A1Q8N128 213 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 SEC31BQ9NQW1 1179 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 RREB1Q92766 1687 aa13.79□□□□□ -0.2
SEC61A1-201ENST00000243253 ASAP1Q9ULH1 1129 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 MYO1BO43795 1136 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 PCCAP05165 728 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 FAM193AP78312 1265 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 RALYLQ86SE5 291 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 PIH1D3Q9NQM4 214 aaKnown RBP13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 SMC2O95347 1197 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 GRIN1Q05586 938 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 GOLGA8FQ08AF8 430 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 GOLGA8DPQ0D2H9 430 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 SPECC1Q5M775 1068 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 TC2NQ8N9U0 490 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
SEC61A1-201ENST00000243253 ZNF213O14771 459 aa13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 PNMA6AP0CW24 399 aaPredicted RBP13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 SYKP43405 635 aa13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 MYL5Q02045 173 aa13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 KRBA2Q6ZNG9 492 aa13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 FANCLQ9NW38 375 aa13.77□□□□□ -0.2
SEC61A1-201ENST00000243253 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 RSRC2Q7L4I2 434 aaKnown RBP13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 WDR17Q8IZU2 1322 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 CCDC158Q5M9N0 1113 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 PHKBQ93100 1093 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 WNK3Q9BYP7 1800 aa13.77□□□□□ -0.21
SEC61A1-201ENST00000243253 SASH3O75995 380 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 ALX1Q15699 326 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 ALG1Q9BT22 464 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 PCDHA5Q9Y5H7 936 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 CACNA1SQ13698 1873 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 GUCY1A2P33402 732 aa13.76□□□□□ -0.21
SEC61A1-201ENST00000243253 TTLL11Q8NHH1 800 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms