RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 IMPACTQ9P2X3 320 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 PPLO60437 1756 aa17.07■□□□□ 0.32
HOXC12-201ENST00000243103 CTAGE9A4FU28 777 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 TEX33O43247 280 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 MYL5Q02045 173 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 FAM76AQ8TAV0 307 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 KIF4AO95239 1232 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
HOXC12-201ENST00000243103 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 CDR1P51861 262 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
HOXC12-201ENST00000243103 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
HOXC12-201ENST00000243103 IQSEC3Q9UPP2 1182 aaPredicted RBP17.06■□□□□ 0.32
HOXC12-201ENST00000243103 ENO4A6NNW6 628 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 CAVIN2O95810 425 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
HOXC12-201ENST00000243103 STIM1Q13586 685 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
HOXC12-201ENST00000243103 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
HOXC12-201ENST00000243103 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 CRB1P82279 1406 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 GRM8O00222 908 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 GCP02774 474 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 PDE4BQ07343 736 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 HELBQ8NG08 1087 aaPredicted RBP17.05■□□□□ 0.32
HOXC12-201ENST00000243103 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 JADE2Q9NQC1 790 aa17.05■□□□□ 0.32
HOXC12-201ENST00000243103 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
HOXC12-201ENST00000243103 IFT88Q13099 833 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 SMARCAL1Q9NZC9 954 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
HOXC12-201ENST00000243103 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
HOXC12-201ENST00000243103 DONSONQ9NYP3 566 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 LGR5O75473 907 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 CDC27P30260 824 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 BRD3Q15059 726 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
HOXC12-201ENST00000243103 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
HOXC12-201ENST00000243103 NLRP12P59046 1061 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 SARNPP82979 210 aaKnown RBP17.03■□□□□ 0.32
HOXC12-201ENST00000243103 PTPROQ16827 1216 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
HOXC12-201ENST00000243103 CCDC148Q8NFR7 591 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 INCENPQ9NQS7 918 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 L1RE1Q9UN81 338 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 GCKP35557 465 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 KSR1Q8IVT5 923 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 TACO1Q9BSH4 297 aaKnown RBP17.03■□□□□ 0.32
HOXC12-201ENST00000243103 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 KIAA1210Q9ULL0 1709 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 MACROD2A1Z1Q3 448 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 CYP21A2P08686 494 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 USP8P40818 1118 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 PPARAQ07869 468 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
HOXC12-201ENST00000243103 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
HOXC12-201ENST00000243103 VPS16Q9H269 839 aa17.03■□□□□ 0.32
HOXC12-201ENST00000243103 PPANQ9NQ55 473 aaKnown RBP17.03■□□□□ 0.32
HOXC12-201ENST00000243103 CXCR5P32302 372 aa17.02■□□□□ 0.32
HOXC12-201ENST00000243103 SEC24CP53992 1094 aa17.02■□□□□ 0.32
HOXC12-201ENST00000243103 RAD9BQ6WBX8 426 aa17.02■□□□□ 0.32
HOXC12-201ENST00000243103 RCOR1Q9UKL0 485 aa17.02■□□□□ 0.32
HOXC12-201ENST00000243103 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.32
HOXC12-201ENST00000243103 ZNF185O15231 689 aa17.02■□□□□ 0.31
HOXC12-201ENST00000243103 MYO1BO43795 1136 aa17.02■□□□□ 0.31
HOXC12-201ENST00000243103 NCAPHQ15003 741 aa17.02■□□□□ 0.31
HOXC12-201ENST00000243103 RSRC2Q7L4I2 434 aaKnown RBP17.02■□□□□ 0.31
HOXC12-201ENST00000243103 MYL10Q9BUA6 226 aa17.02■□□□□ 0.31
HOXC12-201ENST00000243103 USP6P35125 1406 aa17.02■□□□□ 0.31
HOXC12-201ENST00000243103 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 PDHBP11177 359 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
HOXC12-201ENST00000243103 NSUN7Q8NE18 718 aaKnown RBP17.01■□□□□ 0.31
HOXC12-201ENST00000243103 FAM71BQ8TC56 605 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 PHKBQ93100 1093 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 PUS3Q9BZE2 481 aaKnown RBP17.01■□□□□ 0.31
HOXC12-201ENST00000243103 CDC23Q9UJX2 597 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 NAP1L1P55209 391 aaKnown RBP17.01■□□□□ 0.31
HOXC12-201ENST00000243103 RBL2Q08999 1139 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 CCDC114Q96M63 670 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 CASP14P31944 242 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 APBA1Q02410 837 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 ANKRD18AQ8IVF6 992 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 VSTM4Q8IW00 320 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 CMTR1Q8N1G2 835 aaKnown RBP17.01■□□□□ 0.31
HOXC12-201ENST00000243103 CAPS2Q9BXY5 557 aa17.01■□□□□ 0.31
HOXC12-201ENST00000243103 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
HOXC12-201ENST00000243103 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
HOXC12-201ENST00000243103 PLEKHG3A1L390 1219 aa17■□□□□ 0.31
HOXC12-201ENST00000243103 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
HOXC12-201ENST00000243103 MMP14P50281 582 aa17■□□□□ 0.31
HOXC12-201ENST00000243103 ENGASEQ8NFI3 743 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms