RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 SLC12A1Q13621 1099 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 MYOM3Q5VTT5 1437 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 CYP7A1P22680 504 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 MMEL1Q495T6 779 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 ZBTB3Q9H5J0 574 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 SYTL2Q9HCH5 934 aa11.44□□□□□ -0.58
SLF2-201ENST00000238961 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 MCM4P33991 863 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 RNASE9P60153 205 aaKnown RBP11.43□□□□□ -0.58
SLF2-201ENST00000238961 SPAG1Q07617 926 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 NONOQ15233 471 aaKnown RBP eCLIP11.43□□□□□ -0.58
SLF2-201ENST00000238961 DHX58Q96C10 678 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 PGBD1Q96JS3 809 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 BAG2O95816 211 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 GNAQP50148 359 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 STK24Q9Y6E0 443 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 MAP3K21Q5TCX8 1036 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 N4BP2L2Q92802 583 aaPredicted RBP11.43□□□□□ -0.58
SLF2-201ENST00000238961 LRGUKQ96M69 825 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 ANAPC5Q9UJX4 755 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 KRT15P19012 456 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 RRS1Q15050 365 aaKnown RBP11.43□□□□□ -0.58
SLF2-201ENST00000238961 NBPF8Q3BBV2 869 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 NBPF14Q5TI25 921 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 CEP19Q96LK0 163 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 PRXQ9BXM0 1461 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 ACTN4O43707 911 aaKnown RBP11.43□□□□□ -0.58
SLF2-201ENST00000238961 BMP15O95972 392 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 RPL13P26373 211 aaKnown RBP11.43□□□□□ -0.58
SLF2-201ENST00000238961 IRX4P78413 519 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 RTN1Q16799 776 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 ANKRD20A3Q5VUR7 823 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 PLIN2Q99541 437 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 TSGA10Q9BZW7 698 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 ASIC3Q9UHC3 531 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 SLC4A4Q9Y6R1 1079 aa11.43□□□□□ -0.58
SLF2-201ENST00000238961 SYNDIG1LA6NDD5 238 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 TBC1D8O95759 1140 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 KARSQ15046 597 aaKnown RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 TMEM259Q4ZIN3 620 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 ANKLE2Q86XL3 938 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 CCDC124Q96CT7 223 aaKnown RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 RBSNQ9H1K0 784 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 UBN1Q9NPG3 1134 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 MAEAQ7L5Y9 396 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 PCF11O94913 1555 aaKnown RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 TTC4O95801 387 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 ARHGAP4P98171 946 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 FNBP4Q8N3X1 1017 aaPredicted RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 UBL4BQ8N7F7 174 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 GDPD2Q9HCC8 539 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 LZTFL1Q9NQ48 299 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 CAPN9O14815 690 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 KIF22Q14807 665 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 IQCB1Q15051 598 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
SLF2-201ENST00000238961 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 PRKAG2Q9UGJ0 569 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 CCDC152Q4G0S7 254 aa11.42□□□□□ -0.58
SLF2-201ENST00000238961 KHDRBS2Q5VWX1 349 aaKnown RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 PRPF38AQ8NAV1 312 aaKnown RBP11.42□□□□□ -0.58
SLF2-201ENST00000238961 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 ZC3H12BQ5HYM0 836 aaKnown RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 ZNF804AQ7Z570 1209 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 ALG1Q9BT22 464 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 CD19P15391 556 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 DNM2P50570 870 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 TRIM31Q9BZY9 425 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 KAT6BQ8WYB5 2073 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 SERPINI2O75830 405 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 MYCLP12524 364 aaPredicted RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 ESR2Q92731 530 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 ZBTB43O43298 467 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 WHAMMP3Q1A5X7 153 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 MUM1Q2TAK8 710 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
SLF2-201ENST00000238961 CTAGE3PQ8IX95 158 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 HECW1Q76N89 1606 aa11.41□□□□□ -0.58
SLF2-201ENST00000238961 CUL7Q14999 1698 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms