RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SUPT20HQ8NEM7 779 aa21.33■■□□□ 1.01
VIM-201ENST00000224237 INCENPQ9NQS7 918 aa21.33■■□□□ 1.01
VIM-201ENST00000224237 KCNQ5Q9NR82 932 aa21.33■■□□□ 1.01
VIM-201ENST00000224237 TOMM22Q9NS69 142 aa21.33■■□□□ 1.01
VIM-201ENST00000224237 ZSWIM5Q9P217 1185 aa21.33■■□□□ 1.01
VIM-201ENST00000224237 GAKO14976 1311 aa21.32■■□□□ 1
VIM-201ENST00000224237 GPR75-ASB3A0A0A6YYF3 556 aa21.32■■□□□ 1
VIM-201ENST00000224237 USP17L12C9JPN9 530 aa21.32■■□□□ 1
VIM-201ENST00000224237 USP17L21D6R901 530 aa21.32■■□□□ 1
VIM-201ENST00000224237 SMIM22K7EJ46 135 aa21.32■■□□□ 1
VIM-201ENST00000224237 DTNBO60941 627 aa21.32■■□□□ 1
VIM-201ENST00000224237 PLCG2P16885 1265 aa21.32■■□□□ 1
VIM-201ENST00000224237 AOC3Q16853 763 aa21.32■■□□□ 1
VIM-201ENST00000224237 RRP12Q5JTH9 1297 aaKnown RBP21.32■■□□□ 1
VIM-201ENST00000224237 CERS5Q8N5B7 392 aa21.32■■□□□ 1
VIM-201ENST00000224237 SH3RF3Q8TEJ3 882 aaPredicted RBP21.32■■□□□ 1
VIM-201ENST00000224237 PPP1R1BQ9UD71 204 aaPredicted RBP21.32■■□□□ 1
VIM-201ENST00000224237 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
VIM-201ENST00000224237 LIFRP42702 1097 aa21.32■■□□□ 1
VIM-201ENST00000224237 BTDP43251 543 aa21.32■■□□□ 1
VIM-201ENST00000224237 USP5P45974 858 aa21.32■■□□□ 1
VIM-201ENST00000224237 SART3Q15020 963 aaKnown RBP21.32■■□□□ 1
VIM-201ENST00000224237 SMARCC2Q8TAQ2 1214 aa21.32■■□□□ 1
VIM-201ENST00000224237 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
VIM-201ENST00000224237 ESR2Q92731 530 aa21.32■■□□□ 1
VIM-201ENST00000224237 SGIP1Q9BQI5 828 aa21.32■■□□□ 1
VIM-201ENST00000224237 BRPF3Q9ULD4 1205 aa21.32■■□□□ 1
VIM-201ENST00000224237 SCN9AQ15858 1988 aa21.31■■□□□ 1
VIM-201ENST00000224237 GOLGA8BA8MQT2 603 aa21.31■■□□□ 1
VIM-201ENST00000224237 SLC3A2P08195 630 aaKnown RBP21.31■■□□□ 1
VIM-201ENST00000224237 FGRP09769 529 aa21.31■■□□□ 1
VIM-201ENST00000224237 CCT2P78371 535 aaKnown RBP21.31■■□□□ 1
VIM-201ENST00000224237 HMGN5P82970 282 aaKnown RBP21.31■■□□□ 1
VIM-201ENST00000224237 FOXD4L5Q5VV16 416 aaPredicted RBP21.31■■□□□ 1
VIM-201ENST00000224237 STK11IPQ8N1F8 1099 aa21.31■■□□□ 1
VIM-201ENST00000224237 KLHL34Q8N239 644 aa21.31■■□□□ 1
VIM-201ENST00000224237 FOXD4L4Q8WXT5 416 aaPredicted RBP21.31■■□□□ 1
VIM-201ENST00000224237 MKRN1Q9UHC7 482 aaKnown RBP21.31■■□□□ 1
VIM-201ENST00000224237 NAV1Q8NEY1 1877 aa21.31■■□□□ 1
VIM-201ENST00000224237 DHX16O60231 1041 aaKnown RBP21.3■■□□□ 1
VIM-201ENST00000224237 TMEM67Q5HYA8 995 aa21.3■■□□□ 1
VIM-201ENST00000224237 LARP1BQ659C4 914 aaKnown RBP21.3■■□□□ 1
VIM-201ENST00000224237 SGMS1Q86VZ5 419 aa21.3■■□□□ 1
VIM-201ENST00000224237 NSUN7Q8NE18 718 aaKnown RBP21.3■■□□□ 1
VIM-201ENST00000224237 MCM9Q9NXL9 1143 aa21.3■■□□□ 1
VIM-201ENST00000224237 CYP2D7A0A087X1C5 515 aa21.3■■□□□ 1
VIM-201ENST00000224237 F8W031 263 aaPredicted RBP21.3■■□□□ 1
VIM-201ENST00000224237 IFIT3O14879 490 aaKnown RBP21.3■■□□□ 1
VIM-201ENST00000224237 ECE2O60344 883 aa21.3■■□□□ 1
VIM-201ENST00000224237 JAK2O60674 1132 aa21.3■■□□□ 1
VIM-201ENST00000224237 CCDC93Q567U6 631 aa21.3■■□□□ 1
VIM-201ENST00000224237 LY9Q9HBG7 655 aa21.3■■□□□ 1
VIM-201ENST00000224237 ERICH2A1L162 156 aa21.29■■□□□ 1
VIM-201ENST00000224237 EVX2Q03828 476 aa21.29■■□□□ 1
VIM-201ENST00000224237 KIAA2012Q0VF49 1180 aa21.29■■□□□ 1
VIM-201ENST00000224237 AMOTL1Q8IY63 956 aa21.29■■□□□ 1
VIM-201ENST00000224237 MTMR6Q9Y217 621 aa21.29■■□□□ 1
VIM-201ENST00000224237 KIF3AQ9Y496 699 aa21.29■■□□□ 1
VIM-201ENST00000224237 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
VIM-201ENST00000224237 TGFB2P61812 414 aa21.28■■□□□ 1
VIM-201ENST00000224237 FKBP1AP62942 108 aaKnown RBP21.28■■□□□ 1
VIM-201ENST00000224237 STRIP1Q5VSL9 837 aa21.28■■□□□ 1
VIM-201ENST00000224237 MCTP1Q6DN14 999 aa21.28■■□□□ 1
VIM-201ENST00000224237 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
VIM-201ENST00000224237 NCOA5Q9HCD5 579 aaKnown RBP21.28■■□□□ 1
VIM-201ENST00000224237 HPS5Q9UPZ3 1129 aa21.28■■□□□ 1
VIM-201ENST00000224237 PTPDC1A2A3K4 754 aa21.28■■□□□ 1
VIM-201ENST00000224237 CTDNEP1O95476 244 aa21.28■■□□□ 1
VIM-201ENST00000224237 F13A1P00488 732 aa21.28■■□□□ 1
VIM-201ENST00000224237 PTGER2P43116 358 aa21.28■■□□□ 1
VIM-201ENST00000224237 NT5C2P49902 561 aa21.28■■□□□ 1
VIM-201ENST00000224237 APOA5Q6Q788 366 aa21.28■■□□□ 1
VIM-201ENST00000224237 NFXL1Q6ZNB6 911 aa21.28■■□□□ 1
VIM-201ENST00000224237 FAM184AQ8NB25 1140 aa21.28■■□□□ 1
VIM-201ENST00000224237 TGFBRAP1Q8WUH2 860 aa21.28■■□□□ 1
VIM-201ENST00000224237 TTF2Q9UNY4 1162 aaKnown RBP21.28■■□□□ 1
VIM-201ENST00000224237 DAGLAQ9Y4D2 1042 aa21.28■■□□□ 1
VIM-201ENST00000224237 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
VIM-201ENST00000224237 VPS37CA5D8V6 355 aaPredicted RBP21.27■■□□□ 1
VIM-201ENST00000224237 PPIP5K2O43314 1243 aa21.27■■□□□ 1
VIM-201ENST00000224237 ORC4O43929 436 aa21.27■■□□□ 1
VIM-201ENST00000224237 PDE4BQ07343 736 aa21.27■■□□□ 1
VIM-201ENST00000224237 TEX11Q8IYF3 940 aa21.27■■□□□ 1
VIM-201ENST00000224237 TMTC2Q8N394 836 aa21.27■■□□□ 1
VIM-201ENST00000224237 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
VIM-201ENST00000224237 PIM2Q9P1W9 311 aa21.27■■□□□ 1
VIM-201ENST00000224237 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.27■■□□□ 1
VIM-201ENST00000224237 ZNF646O15015 1829 aaPredicted RBP21.27■■□□□ 1
VIM-201ENST00000224237 ADAMTSL1Q8N6G6 1762 aa21.27■■□□□ 1
VIM-201ENST00000224237 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 WTAPQ15007 396 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 C12orf60Q5U649 245 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 PSMD1Q99460 953 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 ROBO3Q96MS0 1386 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
VIM-201ENST00000224237 DDX60LQ5H9U9 1706 aaKnown RBP21.26■□□□□ 0.99
VIM-201ENST00000224237 USP17L8P0C7I0 530 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 METAP2P50579 478 aaKnown RBP eCLIP21.26■□□□□ 0.994e-12■■■□□ 16.4
VIM-201ENST00000224237 RHBDL3P58872 404 aa21.26■□□□□ 0.99
VIM-201ENST00000224237 DDX11Q96FC9 970 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms