RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CCDC169A6NNP5 214 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 TRAF5O00463 557 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 CYP7A1P22680 504 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 TMED1Q13445 227 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 DCUN1D2Q6PH85 259 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 FAM71BQ8TC56 605 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
SPTLC2-201ENST00000216484 U2AF2P26368 475 aaKnown RBP eCLIP16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 ZBTB41Q5SVQ8 909 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 SUFUQ9UMX1 484 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 PHLDB3Q6NSJ2 640 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 ZKSCAN5Q9Y2L8 839 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 NUDCD3Q8IVD9 361 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 ERBINQ96RT1 1412 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 TROVE2P10155 538 aaKnown RBP eCLIP16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 LRGUKQ96M69 825 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 BZW2Q9Y6E2 419 aaKnown RBP16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 TNNI2P48788 182 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 ABTB1Q969K4 478 aaPredicted RBP16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 PKD2L1Q9P0L9 805 aa16.23■□□□□ 0.19
SPTLC2-201ENST00000216484 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 CYP26C1Q6V0L0 522 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 CCDC105Q8IYK2 499 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 TMX3Q96JJ7 454 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 HIP1RO75146 1068 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 ZBTB24O43167 697 aaPredicted RBP16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 VWA3BQ502W6 1294 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 NOX5Q96PH1 765 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 EPS15L1Q9UBC2 864 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 CCNT1O60563 726 aaKnown RBP16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 RSAD2Q8WXG1 361 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 CLCN1P35523 988 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 RPAINQ86UA6 219 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 THEGQ9P2T0 379 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 PTPRCP08575 1304 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 NOD1Q9Y239 953 aa16.22■□□□□ 0.19
SPTLC2-201ENST00000216484 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 CHST3Q7LGC8 479 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 PPP1R42Q7Z4L9 355 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 SKAP1Q86WV1 359 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 VEZTQ9HBM0 779 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 NSD3Q9BZ95 1437 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 BRF1Q92994 677 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 NUCKS1Q9H1E3 243 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 OLA1Q9NTK5 396 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 STRN3Q13033 797 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 PPP2R5AQ15172 486 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 PTPRGP23470 1445 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 SAT1P21673 171 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 TSTA3Q13630 321 aaPredicted RBP16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 PALM2Q8IXS6 379 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 CARD10Q9BWT7 1032 aa16.21■□□□□ 0.19
SPTLC2-201ENST00000216484 VWA3AA6NCI4 1184 aa16.21■□□□□ 0.18
SPTLC2-201ENST00000216484 CALUO43852 315 aaPredicted RBP16.21■□□□□ 0.18
SPTLC2-201ENST00000216484 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.18
SPTLC2-201ENST00000216484 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.18
SPTLC2-201ENST00000216484 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 CLTAP09496 248 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 CDAN1Q8IWY9 1227 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 KLHDC4Q8TBB5 520 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 CCDC152Q4G0S7 254 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 SV2BQ7L1I2 683 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 ANKRD42Q8N9B4 389 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 CAPN7Q9Y6W3 813 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 LUC7L3O95232 432 aaKnown RBP16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 STX2P32856 288 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 PPWD1Q96BP3 646 aaKnown RBP16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 VPS16Q9H269 839 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 ZBBXA8MT70 800 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 ADAMTS2O95450 1211 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 GNA11P29992 359 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 ZRANB2O95218 330 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPTLC2-201ENST00000216484 GNGT2O14610 69 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 KLHL7Q8IXQ5 586 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 CTAGE3PQ8IX95 158 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 IGSF22Q8N9C0 903 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 VPS37BQ9H9H4 285 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 IQSEC3Q9UPP2 1182 aaPredicted RBP16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 RGS16O15492 202 aaPredicted RBP16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 RNF40O75150 1001 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 RTL9Q8NET4 1388 aa16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 RPSAP08865 295 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-201ENST00000216484 CROCCP2Q86T23 111 aa16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 SMAP1Q8IYB5 467 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-201ENST00000216484 PLEKHA4Q9H4M7 779 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms