RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SUGT1Q9Y2Z0 365 aa23.16■■□□□ 1.3
TNFRSF1A-201ENST00000162749 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 GPR75-ASB3A0A0A6YYF3 556 aa23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 TMEM87BQ96K49 555 aa23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ATF5Q9Y2D1 282 aaPredicted RBP23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 ADAMTSL1Q8N6G6 1762 aa23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 MYH1P12882 1939 aa23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 GAKO14976 1311 aa23.15■■□□□ 1.3
TNFRSF1A-201ENST00000162749 SH2B2O14492 632 aaPredicted RBP23.14■■□□□ 1.3
TNFRSF1A-201ENST00000162749 STX6O43752 255 aa23.14■■□□□ 1.3
TNFRSF1A-201ENST00000162749 BTDP43251 543 aa23.14■■□□□ 1.3
TNFRSF1A-201ENST00000162749 RRP12Q5JTH9 1297 aaKnown RBP23.14■■□□□ 1.3
TNFRSF1A-201ENST00000162749 TOMM22Q9NS69 142 aa23.14■■□□□ 1.3
TNFRSF1A-201ENST00000162749 NAP1L2Q9ULW6 460 aaPredicted RBP23.14■■□□□ 1.3
TNFRSF1A-201ENST00000162749 CCT2P78371 535 aaKnown RBP23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 CERS3Q8IU89 383 aa23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SLF2Q8IX21 1173 aa23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 IGDCC4Q8TDY8 1250 aa23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 ARPP21Q9UBL0 812 aaPredicted RBP23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 DDX60LQ5H9U9 1706 aaKnown RBP23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 PSME4Q14997 1843 aa23.14■■□□□ 1.29
TNFRSF1A-201ENST00000162749 KLF18A0A0U1RQI7 1052 aa23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 JAK2O60674 1132 aa23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 EVX2Q03828 476 aa23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 MXD3Q9BW11 206 aa23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 NCOA5Q9HCD5 579 aaKnown RBP23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 KCNQ5Q9NR82 932 aa23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 R3HDM1Q15032 1099 aaKnown RBP23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SBK1Q52WX2 424 aa23.13■■□□□ 1.29
TNFRSF1A-201ENST00000162749 ECE2O60344 883 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 FGRP09769 529 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 USP5P45974 858 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 KIAA2012Q0VF49 1180 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 AOC3Q16853 763 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 UPF1Q92900 1129 aaKnown RBP eCLIP23.12■■□□□ 1.296e-8■■■□□ 16.8
TNFRSF1A-201ENST00000162749 LLPHQ9BRT6 129 aaKnown RBP23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 MCM9Q9NXL9 1143 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 HPS5Q9UPZ3 1129 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 L1TD1Q5T7N2 865 aaKnown RBP23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 NSUN7Q8NE18 718 aaKnown RBP23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 LY9Q9HBG7 655 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SENP2Q9HC62 589 aa23.12■■□□□ 1.29
TNFRSF1A-201ENST00000162749 GOLGA8BA8MQT2 603 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 F8W031 263 aaPredicted RBP23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 CTDNEP1O95476 244 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 PCP11498 1178 aaKnown RBP23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 POLD1P28340 1107 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 TGFBRAP1Q8WUH2 860 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 TTF2Q9UNY4 1162 aaKnown RBP23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 DAGLAQ9Y4D2 1042 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 ECM29Q5VYK3 1845 aa23.11■■□□□ 1.29
TNFRSF1A-201ENST00000162749 USP17L8P0C7I0 530 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 ZSCAN22P10073 491 aaPredicted RBP23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 LIFRP42702 1097 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 RHBDL3P58872 404 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 CCDC93Q567U6 631 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 TMEM67Q5HYA8 995 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SGMS1Q86VZ5 419 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 CYP2D6P10635 497 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 GRIPAP1Q4V328 841 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 LARP1BQ659C4 914 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SUPT20HQ8NEM7 779 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 ESR2Q92731 530 aa23.1■■□□□ 1.29
TNFRSF1A-201ENST00000162749 GOLGA6L3A6NEY3 463 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 IFIT3O14879 490 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 PLCG2P16885 1265 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 STRIP1Q5VSL9 837 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 APOA5Q6Q788 366 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 CHAMP1Q96JM3 812 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 MTA3Q9BTC8 594 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 MTMR6Q9Y217 621 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 PRDM1O75626 825 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 PDCP20941 246 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 PTMSP20962 102 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 TGFB2P61812 414 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SKOR2Q2VWA4 1001 aaPredicted RBP23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 ZKSCAN3Q9BRR0 538 aa23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.09■■□□□ 1.29
TNFRSF1A-201ENST00000162749 C12orf60Q5U649 245 aa23.08■■□□□ 1.29
TNFRSF1A-201ENST00000162749 RAB11FIP4Q86YS3 637 aa23.08■■□□□ 1.29
TNFRSF1A-201ENST00000162749 RTKN2Q8IZC4 609 aa23.08■■□□□ 1.29
TNFRSF1A-201ENST00000162749 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PPIP5K2O43314 1243 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 XRCC6P12956 609 aaKnown RBP eCLIP23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SART3Q15020 963 aaKnown RBP23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 SLC4A8Q2Y0W8 1093 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 DACT2Q5SW24 774 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 MAPKAPK5Q8IW41 473 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 TEX11Q8IYF3 940 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 DDX11Q96FC9 970 aa23.08■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PTPDC1A2A3K4 754 aa23.07■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PDIA4P13667 645 aaKnown RBP23.07■■□□□ 1.28
TNFRSF1A-201ENST00000162749 MCTP1Q6DN14 999 aa23.07■■□□□ 1.28
TNFRSF1A-201ENST00000162749 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
TNFRSF1A-201ENST00000162749 PSMD1Q99460 953 aa23.07■■□□□ 1.28
TNFRSF1A-201ENST00000162749 VPS37CA5D8V6 355 aaPredicted RBP23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 GOLGA6L22H0YM25 854 aa23.06■■□□□ 1.28
TNFRSF1A-201ENST00000162749 ORC4O43929 436 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms