RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Fam228aQ8CDW1 299 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Ankrd49Q8VE42 238 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Tpd52l2Q9CYZ2 220 aaKnown RBP13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Elf2Q9JHC9 593 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Heatr4E9Q357 955 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 MthfslL7N466 203 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Znf697Q569E7 569 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Vps54Q5SPW0 977 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Pram1Q6BCL1 675 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Traf3ip3Q8C0G2 513 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Atg3Q9CPX6 314 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Thap12Q9CUX1 758 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Capn2O08529 700 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 FanccP50652 591 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Mybpc2Q5XKE0 1136 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Clcn1Q64347 994 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Atp1a2Q6PIE5 1020 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Krit1Q6S5J6 736 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 SdsQ8VBT2 327 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Dnajc10Q9DC23 793 aa13.85□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Spata16Q8C636 571 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Lrrc2Q8VDB8 371 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Skint5A7XUY5 1461 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Sult6b1P0CC03 303 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Rsad2Q8CBB9 362 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Nup58Q8R332 587 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Eid1Q9DCR4 169 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Cnpy2Q9QXT0 182 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Sept3Q9Z1S5 350 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Talpid3E9PV87 1520 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Ccdc13D3YV10 709 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Becn2P0DM65 447 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Drc1Q3USS3 753 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 SympkQ80X82 1284 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Zkscan8Q8BSL0 588 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Zfp202Q8C879 641 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Lcmt1A0A0U1RNF2 332 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Taf4E9QAP7 1042 aaKnown RBP13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Cops6O88545 324 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Tom1O88746 492 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Retreg2Q6NS82 541 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Camsap3Q80VC9 1252 aa13.84□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Nedd9O35177 833 aa13.83□□□□□ -0.19
Ssh1-202ENSMUST00000112298 Polr2dQ9D7M8 142 aaKnown RBP13.83□□□□□ -0.19
Ssh1-202ENSMUST00000112298 TsksO54887 585 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ncapd2Q8K2Z4 1392 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ano9P86044 747 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ddb1Q3U1J4 1140 aaKnown RBP13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Itga6Q61739 1091 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Bpifb4A2BGH0 617 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Q4VA45 678 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Rbm17Q8JZX4 405 aaKnown RBP13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Cd2bp2Q9CWK3 342 aaKnown RBP13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ncoa3O09000 1398 aa13.83□□□□□ -0.2
Ssh1-202ENSMUST00000112298 ChkbO55229 394 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 CalcaP70160 136 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Jdp2P97875 163 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 RtcbQ99LF4 505 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Cnnm4Q69ZF7 771 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Gpbp1Q6NXH3 473 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Q8BZJ8 459 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Gm5168Q4KL04 211 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Scaf1Q5U4C3 1256 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 MmeQ61391 750 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Actr5Q80US4 605 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Clasp2Q8BRT1 1286 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Plagl1Q9JLQ4 704 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Znf830Q8R1N0 363 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Naa16Q9DBB4 864 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ssh2Q5SW75 1423 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Exoc3l2D3YUP5 789 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Rps6ka1P18653 724 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 EnahQ03173 802 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ddx49Q4FZF3 480 aaKnown RBP13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ppp2r5eQ61151 467 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ppp6r3Q922D4 844 aa13.82□□□□□ -0.2
Ssh1-202ENSMUST00000112298 PtprgQ05909 1442 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Nup62clA2AG10 272 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Btn2a2A4QPC6 514 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Nfil3O08750 462 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ca8P28651 291 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Eya1P97767 591 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tsr2Q8C8T8 191 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tnpo2Q99LG2 887 aaKnown RBP13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 BC005561E9Q5E2 1589 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Galnt17Q7TT15 598 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Stac3Q8BZ71 360 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Trpc3Q9QZC1 836 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Aox4Q3TYQ9 1336 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Taf4bG5E8Z2 855 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Il4rP16382 810 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Synpo2Q91YE8 1087 aaKnown RBP13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Azi2Q9QYP6 405 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lrrc9Q8CDN9 1456 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Lmbrd2Q8C561 694 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Tekt2Q922G7 430 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ribc1Q9D0B8 379 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Stx17Q9D0I4 301 aa13.81□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Pde1bQ01065 535 aa13.8□□□□□ -0.2
Ssh1-202ENSMUST00000112298 Ddx24Q9ESV0 857 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms