RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Vps18Q8R307 973 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Tubb6Q922F4 447 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Trim59Q922Y2 403 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Efcc1Q9JJF6 558 aa8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Zranb2Q9R020 330 aaKnown RBP8.26□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Abca3Q8R420 1704 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Pet2A2AHY8 747 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Gm29094F6Q785 221 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Dnajc2P54103 621 aaKnown RBP8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 SfswapQ3USH5 945 aaKnown RBP8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Gm21985Q6P6P5 1106 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Trak2Q6P9N8 913 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ccdc82Q6PG04 518 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Cnot6lQ8VEG6 555 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ccer1Q9CQL2 403 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Pold4Q9CWP8 107 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 MthfsQ9D110 203 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 ParvgQ9ERD8 331 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Clic4Q9QYB1 253 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Irs4Q9Z0Y7 1216 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Setdb1O88974 1307 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Znfx1Q8R151 1909 aaKnown RBP8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Fbxl16A2RT62 479 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Tcof1O08784 1320 aaKnown RBP8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mctp2Q5RJH2 878 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Alg3Q8K2A8 438 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mei1Q9D4I2 1268 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Naa16Q9DBB4 864 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ube3bQ9ES34 1070 aa8.25□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ric1Q69ZJ7 1422 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 CrcpO35427 148 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Npy5rO70342 466 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 CebpaP53566 359 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 NfixP70257 488 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mcm6P97311 821 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Cdc37Q61081 379 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Sde2Q8K1J5 448 aaKnown RBP8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Amhr2Q8K592 568 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Riok1Q922Q2 567 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 ChmQ9QXG2 665 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Grin2dQ03391 1323 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Prss40A6H6T1 365 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Slc1a4O35874 532 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Tnni2P13412 182 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Rtkn2Q14B46 604 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ccdc34Q3UI66 367 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Agtpbp1Q641K1 1218 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Rbm15bQ6PHZ5 887 aaKnown RBP8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Q8CEZ4 452 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Slc14a2Q8R4T9 930 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Arl8aQ8VEH3 186 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Eaf2Q91ZD6 262 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Abcb6Q9DC29 842 aa8.24□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Dnajc25A2ALW5 357 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Vmn2r23E9PXI5 849 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Lipo1J3QME6 396 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 LtkP08923 888 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Siah1aP61092 282 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Rps8P62242 208 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Dynll1P63168 89 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Lrriq3Q14DL3 633 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ccdc102aQ3TMW1 549 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Cdcp1Q5U462 833 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Etf1Q8BWY3 437 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Tada3Q8R0L9 432 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Sh3bp5lQ99LH9 392 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 NsmfQ99NF2 532 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ppil4Q9CXG3 492 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 EcsitQ9QZH6 435 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mrvi1Q9WUX5 899 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Large1Q9Z1M7 756 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Letm1Q9Z2I0 738 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Jakmip2D3YXK0 820 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ube4aE9Q735 1028 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Exosc10P56960 887 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Fchsd1Q6PFY1 688 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 McamQ8R2Y2 648 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Mtmr6Q8VE11 617 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Rbm43Q99J64 343 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 BrapQ99MP8 591 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 UtrnE9Q6R7 3430 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Col22a1E9Q7P1 1613 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ktn1Q61595 1327 aaKnown RBP8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Sik3Q6P4S6 1311 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ppp1r21Q3TDD9 780 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Uri1Q3TLD5 531 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Cyp24a1Q64441 514 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Terf2ipQ91VL8 393 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ppp4r3bQ922R5 820 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Adarb2Q9JI20 745 aa8.23□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Map7d2A2AG50 781 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Ankrd63A2ARS0 390 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Slc4a4O88343 1079 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Dok7Q18PE0 504 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Usp13Q5BKP2 858 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Otop3Q80UF9 577 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Fsd2Q8BZ52 692 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 DymQ8CHY3 669 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Lrrc2Q8VDB8 371 aa8.22□□□□□ -1.09
Clrn1-202ENSMUST00000055636 Fam76aQ922G2 307 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms