RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 UBTFP17480 764 aaKnown RBP5.99□□□□□ -1.45
SCN3A-209ENST00000639244 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-209ENST00000639244 ZMYND15Q9H091 742 aa5.98□□□□□ -1.45
SCN3A-209ENST00000639244 ARID3AQ99856 593 aa5.98□□□□□ -1.45
SCN3A-209ENST00000639244 SLC4A1APQ9BWU0 796 aaKnown RBP5.97□□□□□ -1.45
SCN3A-209ENST00000639244 ZBTB7CA1YPR0 619 aa5.94□□□□□ -1.46
SCN3A-209ENST00000639244 PTMAP06454 111 aaKnown RBP5.93□□□□□ -1.46
SCN3A-209ENST00000639244 NAP1L2Q9ULW6 460 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-209ENST00000639244 PUS7Q96PZ0 661 aaKnown RBP5.93□□□□□ -1.46
SCN3A-209ENST00000639244 NEFMP07197 916 aa5.92□□□□□ -1.46
SCN3A-209ENST00000639244 CANXP27824 592 aaKnown RBP5.92□□□□□ -1.46
SCN3A-209ENST00000639244 ANP32BQ92688 251 aaKnown RBP5.91□□□□□ -1.46
SCN3A-209ENST00000639244 CFAP44Q96MT7 982 aa5.91□□□□□ -1.46
SCN3A-209ENST00000639244 PLCD4Q9BRC7 762 aa5.9□□□□□ -1.46
SCN3A-209ENST00000639244 CNPY4Q8N129 248 aa5.9□□□□□ -1.47
SCN3A-209ENST00000639244 TEX2Q8IWB9 1127 aa5.89□□□□□ -1.47
SCN3A-209ENST00000639244 TICAM2Q86XR7 235 aa5.88□□□□□ -1.47
SCN3A-209ENST00000639244 CCDC180Q9P1Z9 1646 aa5.87□□□□□ -1.47
SCN3A-209ENST00000639244 IRX6P78412 446 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-209ENST00000639244 IPO4Q8TEX9 1081 aaKnown RBP5.87□□□□□ -1.47
SCN3A-209ENST00000639244 ZNF526Q8TF50 670 aaPredicted RBP5.87□□□□□ -1.47
SCN3A-209ENST00000639244 NBR1Q14596 966 aa5.86□□□□□ -1.47
SCN3A-209ENST00000639244 WWC1Q8IX03 1113 aa5.85□□□□□ -1.47
SCN3A-209ENST00000639244 SETQ01105 290 aaPredicted RBP5.85□□□□□ -1.47
SCN3A-209ENST00000639244 BBXQ8WY36 941 aaPredicted RBP5.85□□□□□ -1.47
SCN3A-209ENST00000639244 ZNF592Q92610 1267 aa5.85□□□□□ -1.47
SCN3A-209ENST00000639244 NPM1P06748 294 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCN3A-209ENST00000639244 IGSF3O75054 1194 aa5.84□□□□□ -1.47
SCN3A-209ENST00000639244 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
SCN3A-209ENST00000639244 HSP90AA2PQ14568 343 aaPredicted RBP5.84□□□□□ -1.47
SCN3A-209ENST00000639244 RRP9O43818 475 aaKnown RBP5.83□□□□□ -1.48
SCN3A-209ENST00000639244 CHMP4BQ9H444 224 aaKnown RBP5.82□□□□□ -1.48
SCN3A-209ENST00000639244 ZNF316A6NFI3 1004 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-209ENST00000639244 PPM1GO15355 546 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-209ENST00000639244 PATL2C9JE40 543 aaKnown RBP5.81□□□□□ -1.48
SCN3A-209ENST00000639244 ZFP91Q96JP5 570 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-209ENST00000639244 MCCP23508 829 aa5.81□□□□□ -1.48
SCN3A-209ENST00000639244 PRDM10Q9NQV6 1147 aa5.81□□□□□ -1.48
SCN3A-209ENST00000639244 TSHZ2Q9NRE2 1034 aa5.8□□□□□ -1.48
SCN3A-209ENST00000639244 CLGNO14967 610 aa5.8□□□□□ -1.48
SCN3A-209ENST00000639244 BRPF3Q9ULD4 1205 aa5.8□□□□□ -1.48
SCN3A-209ENST00000639244 APPP05067 770 aa5.79□□□□□ -1.48
SCN3A-209ENST00000639244 KDM2AQ9Y2K7 1162 aa5.79□□□□□ -1.48
SCN3A-209ENST00000639244 AXDND1Q5T1B0 1012 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-209ENST00000639244 TNNT2P45379 298 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-209ENST00000639244 DIEXFQ68CQ4 756 aaKnown RBP5.78□□□□□ -1.48
SCN3A-209ENST00000639244 DCAF1Q9Y4B6 1507 aa5.78□□□□□ -1.48
SCN3A-209ENST00000639244 OS9Q13438 667 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-209ENST00000639244 GPATCH11Q8N954 259 aa5.77□□□□□ -1.49
SCN3A-209ENST00000639244 FAM193AP78312 1265 aa5.77□□□□□ -1.49
SCN3A-209ENST00000639244 ANP32AP39687 249 aaKnown RBP5.76□□□□□ -1.49
SCN3A-209ENST00000639244 CERS3Q8IU89 383 aa5.76□□□□□ -1.49
SCN3A-209ENST00000639244 USP35Q9P2H5 1018 aa5.76□□□□□ -1.49
SCN3A-209ENST00000639244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCN3A-209ENST00000639244 ZNF622Q969S3 477 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCN3A-209ENST00000639244 SECISBP2LQ93073 1101 aaKnown RBP5.75□□□□□ -1.49
SCN3A-209ENST00000639244 HSP90AA1P07900 732 aaKnown RBP5.74□□□□□ -1.49
SCN3A-209ENST00000639244 CC2D2BQ6DHV5 1058 aa5.74□□□□□ -1.49
SCN3A-209ENST00000639244 FKBP8Q14318 412 aa5.73□□□□□ -1.49
SCN3A-209ENST00000639244 FBLN2P98095 1184 aa5.73□□□□□ -1.49
SCN3A-209ENST00000639244 GRIPAP1Q4V328 841 aa5.72□□□□□ -1.49
SCN3A-209ENST00000639244 FANCIQ9NVI1 1328 aa5.72□□□□□ -1.49
SCN3A-209ENST00000639244 ANAPC15P60006 121 aa5.72□□□□□ -1.49
SCN3A-209ENST00000639244 TRIM44Q96DX7 344 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-209ENST00000639244 IRX3P78415 501 aaPredicted RBP5.71□□□□□ -1.49
SCN3A-209ENST00000639244 LAS1LQ9Y4W2 734 aaKnown RBP5.71□□□□□ -1.5
SCN3A-209ENST00000639244 CFAP65Q6ZU64 1925 aaKnown RBP5.71□□□□□ -1.5
SCN3A-209ENST00000639244 PHF14O94880 888 aa5.71□□□□□ -1.5
SCN3A-209ENST00000639244 CWC22Q9HCG8 908 aaKnown RBP5.7□□□□□ -1.5
SCN3A-209ENST00000639244 CALD1Q05682 793 aaKnown RBP5.7□□□□□ -1.5
SCN3A-209ENST00000639244 RBM19Q9Y4C8 960 aaKnown RBP5.7□□□□□ -1.5
SCN3A-209ENST00000639244 CC2D1BQ5T0F9 858 aaKnown RBP5.69□□□□□ -1.5
SCN3A-209ENST00000639244 DNAJC2Q99543 621 aaKnown RBP5.69□□□□□ -1.5
SCN3A-209ENST00000639244 SUPT16HQ9Y5B9 1047 aaKnown RBP5.69□□□□□ -1.5
SCN3A-209ENST00000639244 IL27Q8NEV9 243 aa5.68□□□□□ -1.5
SCN3A-209ENST00000639244 RAD21O60216 631 aa5.68□□□□□ -1.5
SCN3A-209ENST00000639244 TAF3Q5VWG9 929 aa5.68□□□□□ -1.5
SCN3A-209ENST00000639244 RNF216Q9NWF9 866 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-209ENST00000639244 HDAC5Q9UQL6 1122 aa5.68□□□□□ -1.5
SCN3A-209ENST00000639244 VGFO15240 615 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-209ENST00000639244 PPP6R1Q9UPN7 881 aa5.67□□□□□ -1.5
SCN3A-209ENST00000639244 CHRM1P11229 460 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-209ENST00000639244 GTF2E1P29083 439 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-209ENST00000639244 RBM25P49756 843 aaKnown RBP5.67□□□□□ -1.5
SCN3A-209ENST00000639244 KCTD17Q8N5Z5 321 aa5.67□□□□□ -1.5
SCN3A-209ENST00000639244 DNTTIP2Q5QJE6 756 aaKnown RBP5.66□□□□□ -1.5
SCN3A-209ENST00000639244 TMED8Q6PL24 325 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-209ENST00000639244 C11orf95C9JLR9 678 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-209ENST00000639244 MAFGO15525 162 aa5.66□□□□□ -1.5
SCN3A-209ENST00000639244 FAM177A1Q8N128 213 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-209ENST00000639244 FAM50AQ14320 339 aaKnown RBP5.64□□□□□ -1.51
SCN3A-209ENST00000639244 PHF23Q9BUL5 403 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-209ENST00000639244 ATP1B4Q9UN42 357 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-209ENST00000639244 STAC3Q96MF2 364 aa5.63□□□□□ -1.51
SCN3A-209ENST00000639244 PRDM16Q9HAZ2 1276 aa5.63□□□□□ -1.51
SCN3A-209ENST00000639244 HSP90AB4PQ58FF6 505 aa5.63□□□□□ -1.51
SCN3A-209ENST00000639244 FAM43AQ8N2R8 423 aa5.63□□□□□ -1.51
SCN3A-209ENST00000639244 CASC1Q6TDU7 716 aa5.62□□□□□ -1.51
SCN3A-209ENST00000639244 RGS22Q8NE09 1264 aa5.62□□□□□ -1.51
SCN3A-209ENST00000639244 CEP120Q8N960 986 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms