RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
LRCH3-210ENST00000461674 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
LRCH3-210ENST00000461674 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
LRCH3-210ENST00000461674 POLA2Q14181 598 aa12.75□□□□□ -0.37
LRCH3-210ENST00000461674 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
LRCH3-210ENST00000461674 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
LRCH3-210ENST00000461674 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
LRCH3-210ENST00000461674 HRCP23327 699 aa12.67□□□□□ -0.38
LRCH3-210ENST00000461674 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
LRCH3-210ENST00000461674 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
LRCH3-210ENST00000461674 TRHP20396 242 aaPredicted RBP12.64□□□□□ -0.39
LRCH3-210ENST00000461674 ZC3H15Q8WU90 426 aaKnown RBP12.63□□□□□ -0.39
LRCH3-210ENST00000461674 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
LRCH3-210ENST00000461674 GSE1Q14687 1217 aa12.62□□□□□ -0.39
LRCH3-210ENST00000461674 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
LRCH3-210ENST00000461674 STK25O00506 426 aa12.61□□□□□ -0.39
LRCH3-210ENST00000461674 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
LRCH3-210ENST00000461674 SLC24A3Q9HC58 644 aa12.58□□□□□ -0.4
LRCH3-210ENST00000461674 WDR70Q9NW82 654 aa12.56□□□□□ -0.4
LRCH3-210ENST00000461674 VGFO15240 615 aaPredicted RBP12.55□□□□□ -0.4
LRCH3-210ENST00000461674 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
LRCH3-210ENST00000461674 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
LRCH3-210ENST00000461674 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
LRCH3-210ENST00000461674 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRCH3-210ENST00000461674 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
LRCH3-210ENST00000461674 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
LRCH3-210ENST00000461674 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
LRCH3-210ENST00000461674 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
LRCH3-210ENST00000461674 ARID3AQ99856 593 aa12.43□□□□□ -0.42
LRCH3-210ENST00000461674 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
LRCH3-210ENST00000461674 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
LRCH3-210ENST00000461674 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
LRCH3-210ENST00000461674 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
LRCH3-210ENST00000461674 ZMYND10O75800 440 aa12.4□□□□□ -0.42
LRCH3-210ENST00000461674 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
LRCH3-210ENST00000461674 NUBP1P53384 320 aa12.39□□□□□ -0.43
LRCH3-210ENST00000461674 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
LRCH3-210ENST00000461674 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
LRCH3-210ENST00000461674 CAPN15O75808 1086 aa12.37□□□□□ -0.43
LRCH3-210ENST00000461674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-210ENST00000461674 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
LRCH3-210ENST00000461674 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
LRCH3-210ENST00000461674 PDIA4P13667 645 aaKnown RBP12.34□□□□□ -0.43
LRCH3-210ENST00000461674 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
LRCH3-210ENST00000461674 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
LRCH3-210ENST00000461674 SEMA3EO15041 775 aa12.29□□□□□ -0.44
LRCH3-210ENST00000461674 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
LRCH3-210ENST00000461674 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
LRCH3-210ENST00000461674 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
LRCH3-210ENST00000461674 ABCB7O75027 752 aa12.26□□□□□ -0.45
LRCH3-210ENST00000461674 IL27Q8NEV9 243 aa12.25□□□□□ -0.45
LRCH3-210ENST00000461674 AK7Q96M32 723 aa12.25□□□□□ -0.45
LRCH3-210ENST00000461674 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
LRCH3-210ENST00000461674 APBB1O00213 710 aa12.23□□□□□ -0.45
LRCH3-210ENST00000461674 E2F4Q16254 413 aa12.23□□□□□ -0.45
LRCH3-210ENST00000461674 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
LRCH3-210ENST00000461674 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
LRCH3-210ENST00000461674 KDM4CQ9H3R0 1056 aa12.2□□□□□ -0.46
LRCH3-210ENST00000461674 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
LRCH3-210ENST00000461674 FLIIQ13045 1269 aa12.13□□□□□ -0.47
LRCH3-210ENST00000461674 PDE4DQ08499 809 aa12.07□□□□□ -0.48
LRCH3-210ENST00000461674 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
LRCH3-210ENST00000461674 KCTD17Q8N5Z5 321 aa12.06□□□□□ -0.48
LRCH3-210ENST00000461674 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
LRCH3-210ENST00000461674 TRIM66O15016 1216 aa12.05□□□□□ -0.48
LRCH3-210ENST00000461674 GPIHBP1Q8IV16 184 aa12.04□□□□□ -0.48
LRCH3-210ENST00000461674 TRAIPQ9BWF2 469 aa12.03□□□□□ -0.48
LRCH3-210ENST00000461674 A6NJR5 290 aa12.02□□□□□ -0.49
LRCH3-210ENST00000461674 PYGBP11216 843 aa12.02□□□□□ -0.49
LRCH3-210ENST00000461674 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
LRCH3-210ENST00000461674 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
LRCH3-210ENST00000461674 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
LRCH3-210ENST00000461674 MFRPQ9BY79 579 aa12□□□□□ -0.49
LRCH3-210ENST00000461674 TRAK2O60296 914 aa11.97□□□□□ -0.49
LRCH3-210ENST00000461674 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-210ENST00000461674 FAM117AQ9C073 453 aa11.97□□□□□ -0.49
LRCH3-210ENST00000461674 RNF39Q9H2S5 420 aa11.97□□□□□ -0.49
LRCH3-210ENST00000461674 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.49
LRCH3-210ENST00000461674 RAD21O60216 631 aa11.96□□□□□ -0.49
LRCH3-210ENST00000461674 DDRGK1Q96HY6 314 aa11.96□□□□□ -0.49
LRCH3-210ENST00000461674 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
LRCH3-210ENST00000461674 RBM26Q5T8P6 1007 aaKnown RBP11.94□□□□□ -0.5
LRCH3-210ENST00000461674 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
LRCH3-210ENST00000461674 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
LRCH3-210ENST00000461674 PLEKHG3A1L390 1219 aa11.92□□□□□ -0.5
LRCH3-210ENST00000461674 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
LRCH3-210ENST00000461674 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
LRCH3-210ENST00000461674 RGS22Q8NE09 1264 aa11.92□□□□□ -0.5
LRCH3-210ENST00000461674 PPP1R37O75864 691 aa11.9□□□□□ -0.5
LRCH3-210ENST00000461674 MFSD10Q14728 455 aa11.89□□□□□ -0.51
LRCH3-210ENST00000461674 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
LRCH3-210ENST00000461674 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
LRCH3-210ENST00000461674 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
LRCH3-210ENST00000461674 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
LRCH3-210ENST00000461674 DSG3P32926 999 aa11.86□□□□□ -0.51
LRCH3-210ENST00000461674 TMCO4Q5TGY1 634 aa11.86□□□□□ -0.51
LRCH3-210ENST00000461674 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
LRCH3-210ENST00000461674 AEBP1Q8IUX7 1158 aa11.85□□□□□ -0.51
LRCH3-210ENST00000461674 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
LRCH3-210ENST00000461674 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms