RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
CLSTN2-201ENST00000458420 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
CLSTN2-201ENST00000458420 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
CLSTN2-201ENST00000458420 TMC1Q8TDI8 760 aa9.53□□□□□ -0.88
CLSTN2-201ENST00000458420 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
CLSTN2-201ENST00000458420 ANO8Q9HCE9 1232 aaPredicted RBP9.52□□□□□ -0.89
CLSTN2-201ENST00000458420 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
CLSTN2-201ENST00000458420 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
CLSTN2-201ENST00000458420 FAM9BQ8IZU0 186 aa9.48□□□□□ -0.89
CLSTN2-201ENST00000458420 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
CLSTN2-201ENST00000458420 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLSTN2-201ENST00000458420 NBR1Q14596 966 aa9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 ANP32AP39687 249 aaKnown RBP9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 MYH16Q9H6N6 1097 aa9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 MSH5O43196 834 aa9.43□□□□□ -0.9
CLSTN2-201ENST00000458420 PDE4CQ08493 712 aa9.42□□□□□ -0.9
CLSTN2-201ENST00000458420 G3V3G9 751 aa9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 FBXO3Q9UK99 471 aa9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 PAK3O75914 559 aaPredicted RBP9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 MEX3CQ5U5Q3 659 aaKnown RBP9.4□□□□□ -0.9
CLSTN2-201ENST00000458420 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
CLSTN2-201ENST00000458420 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
CLSTN2-201ENST00000458420 TSPY4P0CV99 314 aa9.39□□□□□ -0.91
CLSTN2-201ENST00000458420 TSPY10P0CW01 314 aa9.39□□□□□ -0.91
CLSTN2-201ENST00000458420 OS9Q13438 667 aaPredicted RBP9.37□□□□□ -0.91
CLSTN2-201ENST00000458420 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
CLSTN2-201ENST00000458420 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
CLSTN2-201ENST00000458420 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
CLSTN2-201ENST00000458420 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
CLSTN2-201ENST00000458420 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLSTN2-201ENST00000458420 POGKQ9P215 609 aa9.35□□□□□ -0.91
CLSTN2-201ENST00000458420 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
CLSTN2-201ENST00000458420 ZRSR1Q15695 479 aaKnown RBP9.34□□□□□ -0.91
CLSTN2-201ENST00000458420 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
CLSTN2-201ENST00000458420 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
CLSTN2-201ENST00000458420 FGD1P98174 961 aa9.32□□□□□ -0.92
CLSTN2-201ENST00000458420 IRX6P78412 446 aaPredicted RBP9.32□□□□□ -0.92
CLSTN2-201ENST00000458420 HNRNPUQ00839 825 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLSTN2-201ENST00000458420 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
CLSTN2-201ENST00000458420 PPP1R1BQ9UD71 204 aaPredicted RBP9.31□□□□□ -0.92
CLSTN2-201ENST00000458420 CNKSR2Q8WXI2 1034 aa9.29□□□□□ -0.92
CLSTN2-201ENST00000458420 RRP7BPQ9NSQ0 103 aa9.29□□□□□ -0.92
CLSTN2-201ENST00000458420 DDX10Q13206 875 aaKnown RBP9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 STK26Q9P289 416 aa9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 FKBP8Q14318 412 aa9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 TONSLQ96HA7 1378 aa9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 KCNJ4P48050 445 aa9.26□□□□□ -0.93
CLSTN2-201ENST00000458420 VPS53Q5VIR6 699 aa9.26□□□□□ -0.93
CLSTN2-201ENST00000458420 ERICH6BQ5W0A0 696 aa9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
CLSTN2-201ENST00000458420 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
CLSTN2-201ENST00000458420 RAD21O60216 631 aa9.24□□□□□ -0.93
CLSTN2-201ENST00000458420 CWC22Q9HCG8 908 aaKnown RBP9.23□□□□□ -0.93
CLSTN2-201ENST00000458420 DNTTIP2Q5QJE6 756 aaKnown RBP9.23□□□□□ -0.93
CLSTN2-201ENST00000458420 PTMAP06454 111 aaKnown RBP9.23□□□□□ -0.93
CLSTN2-201ENST00000458420 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
CLSTN2-201ENST00000458420 FRAT2O75474 233 aaPredicted RBP9.21□□□□□ -0.93
CLSTN2-201ENST00000458420 GGT6Q6P531 493 aa9.21□□□□□ -0.93
CLSTN2-201ENST00000458420 GTF2E1P29083 439 aaPredicted RBP9.21□□□□□ -0.93
CLSTN2-201ENST00000458420 SAMD1Q6SPF0 538 aaPredicted RBP9.21□□□□□ -0.94
CLSTN2-201ENST00000458420 FTSJ3Q8IY81 847 aaKnown RBP9.21□□□□□ -0.94
CLSTN2-201ENST00000458420 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
CLSTN2-201ENST00000458420 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
CLSTN2-201ENST00000458420 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 EVA1CP58658 441 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 CASC1Q6TDU7 716 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 APBB1O00213 710 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 SRPK2P78362 688 aaKnown RBP9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 SYTL4Q96C24 671 aaPredicted RBP9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 TAF7LQ5H9L4 462 aa9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 FRAT1Q92837 279 aaPredicted RBP9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 LTV1Q96GA3 475 aaPredicted RBP9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 CFAP53Q96M91 514 aa9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 GNL2Q13823 731 aaKnown RBP9.16□□□□□ -0.94
CLSTN2-201ENST00000458420 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.94
CLSTN2-201ENST00000458420 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
CLSTN2-201ENST00000458420 MTUS2Q5JR59 1369 aa9.13□□□□□ -0.95
CLSTN2-201ENST00000458420 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
CLSTN2-201ENST00000458420 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 NOC3LQ8WTT2 800 aaKnown RBP9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 KNSTRNQ9Y448 316 aa9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 HDGFP51858 240 aaKnown RBP9.11□□□□□ -0.95
CLSTN2-201ENST00000458420 GOLGA6L22H0YM25 854 aa9.11□□□□□ -0.95
CLSTN2-201ENST00000458420 GORABQ5T7V8 394 aa9.11□□□□□ -0.95
CLSTN2-201ENST00000458420 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
CLSTN2-201ENST00000458420 WDR70Q9NW82 654 aa9.1□□□□□ -0.95
CLSTN2-201ENST00000458420 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms