RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 KIAA2012Q0VF49 1180 aa12.02□□□□□ -0.48
CD109-202ENST00000422508 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.49
CD109-202ENST00000422508 SCRIBQ14160 1630 aa12□□□□□ -0.49
CD109-202ENST00000422508 NAP1L5Q96NT1 182 aaPredicted RBP12□□□□□ -0.49
CD109-202ENST00000422508 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
CD109-202ENST00000422508 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
CD109-202ENST00000422508 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.5
CD109-202ENST00000422508 MCCP23508 829 aa11.96□□□□□ -0.5
CD109-202ENST00000422508 CCDC34Q96HJ3 373 aa11.95□□□□□ -0.5
CD109-202ENST00000422508 SYAP1Q96A49 352 aaPredicted RBP11.95□□□□□ -0.5
CD109-202ENST00000422508 GOLGA6L1Q8N7Z2 621 aa11.94□□□□□ -0.5
CD109-202ENST00000422508 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
CD109-202ENST00000422508 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
CD109-202ENST00000422508 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
CD109-202ENST00000422508 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
CD109-202ENST00000422508 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
CD109-202ENST00000422508 NOP58Q9Y2X3 529 aaKnown RBP11.9□□□□□ -0.5
CD109-202ENST00000422508 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.51
CD109-202ENST00000422508 GOLGA6L4A6NEF3 574 aa11.89□□□□□ -0.51
CD109-202ENST00000422508 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
CD109-202ENST00000422508 PHF14O94880 888 aa11.89□□□□□ -0.51
CD109-202ENST00000422508 ARXQ96QS3 562 aa11.88□□□□□ -0.51
CD109-202ENST00000422508 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CD109-202ENST00000422508 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
CD109-202ENST00000422508 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
CD109-202ENST00000422508 TPM4P67936 248 aa11.88□□□□□ -0.51
CD109-202ENST00000422508 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
CD109-202ENST00000422508 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
CD109-202ENST00000422508 MTUS2Q5JR59 1369 aa11.87□□□□□ -0.51
CD109-202ENST00000422508 NOC3LQ8WTT2 800 aaKnown RBP11.86□□□□□ -0.51
CD109-202ENST00000422508 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
CD109-202ENST00000422508 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
CD109-202ENST00000422508 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
CD109-202ENST00000422508 KAT6BQ8WYB5 2073 aa11.84□□□□□ -0.51
CD109-202ENST00000422508 TSPY4P0CV99 314 aa11.84□□□□□ -0.51
CD109-202ENST00000422508 TSPY10P0CW01 314 aa11.84□□□□□ -0.51
CD109-202ENST00000422508 KNSTRNQ9Y448 316 aa11.84□□□□□ -0.51
CD109-202ENST00000422508 PPP4R2Q9NY27 417 aa11.83□□□□□ -0.52
CD109-202ENST00000422508 FGD1P98174 961 aa11.82□□□□□ -0.52
CD109-202ENST00000422508 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
CD109-202ENST00000422508 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
CD109-202ENST00000422508 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
CD109-202ENST00000422508 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
CD109-202ENST00000422508 CALRP27797 417 aaKnown RBP11.81□□□□□ -0.52
CD109-202ENST00000422508 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
CD109-202ENST00000422508 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
CD109-202ENST00000422508 FBLN2P98095 1184 aa11.81□□□□□ -0.52
CD109-202ENST00000422508 A0A0U1RQG5 324 aaPredicted RBP11.8□□□□□ -0.52
CD109-202ENST00000422508 MAPK8IP3Q9UPT6 1336 aa11.79□□□□□ -0.52
CD109-202ENST00000422508 CLIP1P30622 1438 aa11.79□□□□□ -0.52
CD109-202ENST00000422508 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
CD109-202ENST00000422508 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
CD109-202ENST00000422508 GOLGA2Q08379 1002 aa11.77□□□□□ -0.52
CD109-202ENST00000422508 ZCCHC6Q5VYS8 1495 aaKnown RBP11.77□□□□□ -0.53
CD109-202ENST00000422508 KCNJ4P48050 445 aa11.77□□□□□ -0.53
CD109-202ENST00000422508 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
CD109-202ENST00000422508 GPS2Q13227 327 aa11.76□□□□□ -0.53
CD109-202ENST00000422508 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
CD109-202ENST00000422508 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
CD109-202ENST00000422508 NACADO15069 1562 aa11.74□□□□□ -0.53
CD109-202ENST00000422508 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
CD109-202ENST00000422508 LAS1LQ9Y4W2 734 aaKnown RBP11.74□□□□□ -0.53
CD109-202ENST00000422508 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
CD109-202ENST00000422508 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
CD109-202ENST00000422508 PHLDB1Q86UU1 1377 aa11.74□□□□□ -0.53
CD109-202ENST00000422508 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
CD109-202ENST00000422508 ABCC9O60706 1549 aa11.73□□□□□ -0.53
CD109-202ENST00000422508 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
CD109-202ENST00000422508 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
CD109-202ENST00000422508 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
CD109-202ENST00000422508 CEP162Q5TB80 1403 aa11.73□□□□□ -0.53
CD109-202ENST00000422508 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
CD109-202ENST00000422508 TIMELESSQ9UNS1 1208 aa11.72□□□□□ -0.53
CD109-202ENST00000422508 IPO8O15397 1037 aaKnown RBP11.71□□□□□ -0.53
CD109-202ENST00000422508 KANK1Q14678 1352 aa11.71□□□□□ -0.54
CD109-202ENST00000422508 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.54
CD109-202ENST00000422508 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
CD109-202ENST00000422508 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
CD109-202ENST00000422508 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
CD109-202ENST00000422508 NOM1Q5C9Z4 860 aaKnown RBP11.68□□□□□ -0.54
CD109-202ENST00000422508 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
CD109-202ENST00000422508 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
CD109-202ENST00000422508 TEX35Q5T0J7 233 aa11.66□□□□□ -0.54
CD109-202ENST00000422508 TPM3P06753 285 aa11.65□□□□□ -0.54
CD109-202ENST00000422508 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
CD109-202ENST00000422508 ATP6V1DQ9Y5K8 247 aa11.65□□□□□ -0.54
CD109-202ENST00000422508 CCER2I3L3R5 266 aa11.65□□□□□ -0.55
CD109-202ENST00000422508 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
CD109-202ENST00000422508 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
CD109-202ENST00000422508 SKOR2Q2VWA4 1001 aaPredicted RBP11.63□□□□□ -0.55
CD109-202ENST00000422508 NPHP1O15259 732 aa11.63□□□□□ -0.55
CD109-202ENST00000422508 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
CD109-202ENST00000422508 TPM1P09493 284 aa11.63□□□□□ -0.55
CD109-202ENST00000422508 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
CD109-202ENST00000422508 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
CD109-202ENST00000422508 KIF27Q86VH2 1401 aa11.62□□□□□ -0.55
CD109-202ENST00000422508 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
CD109-202ENST00000422508 TPM2P07951 284 aa11.61□□□□□ -0.55
CD109-202ENST00000422508 HMMRO75330 724 aa11.61□□□□□ -0.55
CD109-202ENST00000422508 CLSTN1O94985 981 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms