RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CCNB3Q8WWL7 1395 aa5.45□□□□□ -1.54
SYNE2-204ENST00000358025 FAM50AQ14320 339 aaKnown RBP5.45□□□□□ -1.54
SYNE2-204ENST00000358025 TNNT2P45379 298 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-204ENST00000358025 AAMPQ13685 434 aa5.44□□□□□ -1.54
SYNE2-204ENST00000358025 BAZ1BQ9UIG0 1483 aaKnown RBP5.44□□□□□ -1.54
SYNE2-204ENST00000358025 L1TD1Q5T7N2 865 aaKnown RBP5.44□□□□□ -1.54
SYNE2-204ENST00000358025 CDCA8Q53HL2 280 aa5.44□□□□□ -1.54
SYNE2-204ENST00000358025 CHMP4BQ9H444 224 aaKnown RBP5.43□□□□□ -1.54
SYNE2-204ENST00000358025 VPS8Q8N3P4 1428 aa5.43□□□□□ -1.54
SYNE2-204ENST00000358025 BAZ1AQ9NRL2 1556 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-204ENST00000358025 STAC3Q96MF2 364 aa5.42□□□□□ -1.54
SYNE2-204ENST00000358025 DEKP35659 375 aaKnown RBP5.42□□□□□ -1.54
SYNE2-204ENST00000358025 KIF27Q86VH2 1401 aa5.42□□□□□ -1.54
SYNE2-204ENST00000358025 KTN1Q86UP2 1357 aaKnown RBP5.41□□□□□ -1.54
SYNE2-204ENST00000358025 PLPPR3Q6T4P5 718 aa5.41□□□□□ -1.54
SYNE2-204ENST00000358025 SETD5Q9C0A6 1442 aa5.41□□□□□ -1.54
SYNE2-204ENST00000358025 GOLGA6L22H0YM25 854 aa5.4□□□□□ -1.54
SYNE2-204ENST00000358025 ISY1Q9ULR0 285 aaKnown RBP5.4□□□□□ -1.54
SYNE2-204ENST00000358025 TRIM44Q96DX7 344 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-204ENST00000358025 PPP1R15AO75807 674 aaPredicted RBP5.4□□□□□ -1.54
SYNE2-204ENST00000358025 MRS2Q9HD23 443 aa5.4□□□□□ -1.54
SYNE2-204ENST00000358025 IPO9Q96P70 1041 aaKnown RBP5.4□□□□□ -1.54
SYNE2-204ENST00000358025 RALBP1Q15311 655 aa5.4□□□□□ -1.54
SYNE2-204ENST00000358025 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
SYNE2-204ENST00000358025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.4□□□□□ -1.55
SYNE2-204ENST00000358025 MTERF4Q7Z6M4 381 aaKnown RBP5.4□□□□□ -1.55
SYNE2-204ENST00000358025 ABCC9O60706 1549 aa5.4□□□□□ -1.55
SYNE2-204ENST00000358025 ROCK2O75116 1388 aaKnown RBP5.4□□□□□ -1.55
SYNE2-204ENST00000358025 TRIM52Q96A61 297 aa5.38□□□□□ -1.55
SYNE2-204ENST00000358025 MAP7D2Q96T17 732 aa5.38□□□□□ -1.55
SYNE2-204ENST00000358025 BCANQ96GW7 911 aa5.38□□□□□ -1.55
SYNE2-204ENST00000358025 IL27Q8NEV9 243 aa5.37□□□□□ -1.55
SYNE2-204ENST00000358025 NEFMP07197 916 aa5.37□□□□□ -1.55
SYNE2-204ENST00000358025 WASHC2AQ641Q2 1341 aa5.36□□□□□ -1.55
SYNE2-204ENST00000358025 WASHC2CQ9Y4E1 1318 aa5.36□□□□□ -1.55
SYNE2-204ENST00000358025 ZBED9Q6R2W3 1325 aa5.36□□□□□ -1.55
SYNE2-204ENST00000358025 SKOR2Q2VWA4 1001 aaPredicted RBP5.34□□□□□ -1.55
SYNE2-204ENST00000358025 SCRIBQ14160 1630 aa5.33□□□□□ -1.56
SYNE2-204ENST00000358025 PNNQ9H307 717 aaKnown RBP5.32□□□□□ -1.56
SYNE2-204ENST00000358025 RSPH4AQ5TD94 716 aa5.32□□□□□ -1.56
SYNE2-204ENST00000358025 MTUS2Q5JR59 1369 aa5.31□□□□□ -1.56
SYNE2-204ENST00000358025 NBR1Q14596 966 aa5.31□□□□□ -1.56
SYNE2-204ENST00000358025 MAP3K1Q13233 1512 aa5.31□□□□□ -1.56
SYNE2-204ENST00000358025 HSP90AA1P07900 732 aaKnown RBP5.31□□□□□ -1.56
SYNE2-204ENST00000358025 MAPK8IP3Q9UPT6 1336 aa5.31□□□□□ -1.56
SYNE2-204ENST00000358025 RCAN3Q9UKA8 241 aa5.31□□□□□ -1.56
SYNE2-204ENST00000358025 HAP1P54257 671 aaPredicted RBP5.31□□□□□ -1.56
SYNE2-204ENST00000358025 C11orf95C9JLR9 678 aaPredicted RBP5.3□□□□□ -1.56
SYNE2-204ENST00000358025 DHX57Q6P158 1386 aaKnown RBP5.3□□□□□ -1.56
SYNE2-204ENST00000358025 SENP3Q9H4L4 574 aaPredicted RBP5.3□□□□□ -1.56
SYNE2-204ENST00000358025 FMN1Q68DA7 1419 aa5.29□□□□□ -1.56
SYNE2-204ENST00000358025 RAB3GAP2Q9H2M9 1393 aa5.29□□□□□ -1.56
SYNE2-204ENST00000358025 RRP9O43818 475 aaKnown RBP5.29□□□□□ -1.56
SYNE2-204ENST00000358025 NLRP13Q86W25 1043 aa5.29□□□□□ -1.56
SYNE2-204ENST00000358025 NUDCQ9Y266 331 aa5.29□□□□□ -1.56
SYNE2-204ENST00000358025 WDR43Q15061 677 aaKnown RBP eCLIP5.28□□□□□ -1.56
SYNE2-204ENST00000358025 TAF3Q5VWG9 929 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 GSE1Q14687 1217 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 RRBP1Q9P2E9 1410 aaKnown RBP5.28□□□□□ -1.56
SYNE2-204ENST00000358025 CENPQQ7L2Z9 268 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-204ENST00000358025 PLEKHG5O94827 1062 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 GBP4Q96PP9 640 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 TSPY4P0CV99 314 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 TSPY10P0CW01 314 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 DDX11L8A8MPP1 907 aa5.28□□□□□ -1.56
SYNE2-204ENST00000358025 CASC1Q6TDU7 716 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 PHF14O94880 888 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 TOP2AP11388 1531 aaKnown RBP5.27□□□□□ -1.57
SYNE2-204ENST00000358025 FAM9BQ8IZU0 186 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 FAM43AQ8N2R8 423 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 HSP90AA2PQ14568 343 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-204ENST00000358025 CHMP4AQ9BY43 222 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 MIA2Q96PC5 1412 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 CARMIL1Q5VZK9 1371 aa5.27□□□□□ -1.57
SYNE2-204ENST00000358025 PDIA4P13667 645 aaKnown RBP5.26□□□□□ -1.57
SYNE2-204ENST00000358025 SMARCA2P51531 1590 aa5.26□□□□□ -1.57
SYNE2-204ENST00000358025 CSPP1Q1MSJ5 1256 aa5.26□□□□□ -1.57
SYNE2-204ENST00000358025 CCDC18Q5T9S5 1454 aa5.26□□□□□ -1.57
SYNE2-204ENST00000358025 IPO8O15397 1037 aaKnown RBP5.26□□□□□ -1.57
SYNE2-204ENST00000358025 CCDC88BA6NC98 1476 aa5.26□□□□□ -1.57
SYNE2-204ENST00000358025 KIF21BO75037 1637 aa5.26□□□□□ -1.57
SYNE2-204ENST00000358025 MYH16Q9H6N6 1097 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 PMFBP1Q8TBY8 1022 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 KNSTRNQ9Y448 316 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 LAS1LQ9Y4W2 734 aaKnown RBP5.25□□□□□ -1.57
SYNE2-204ENST00000358025 B4GALNT3Q6L9W6 998 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 ERICH3Q5RHP9 1530 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 AKNAQ7Z591 1439 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 FAM161AQ3B820 660 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 MROH2BQ7Z745 1585 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 TPM2P07951 284 aa5.25□□□□□ -1.57
SYNE2-204ENST00000358025 CALD1Q05682 793 aaKnown RBP5.24□□□□□ -1.57
SYNE2-204ENST00000358025 EIF3AQ14152 1382 aaKnown RBP5.24□□□□□ -1.57
SYNE2-204ENST00000358025 CANXP27824 592 aaKnown RBP5.24□□□□□ -1.57
SYNE2-204ENST00000358025 BRD4O60885 1362 aaPredicted RBP5.24□□□□□ -1.57
SYNE2-204ENST00000358025 INSRP06213 1382 aa5.24□□□□□ -1.57
SYNE2-204ENST00000358025 KIF15Q9NS87 1388 aa5.24□□□□□ -1.57
SYNE2-204ENST00000358025 GOLGA6L3A6NEY3 463 aa5.24□□□□□ -1.57
SYNE2-204ENST00000358025 DHX8Q14562 1220 aaKnown RBP5.24□□□□□ -1.57
SYNE2-204ENST00000358025 CHAF1AQ13111 956 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms