RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.048e-7■■■□□ 16.1
VPS13B-202ENST00000357162 NACADO15069 1562 aa8.56□□□□□ -1.04
VPS13B-202ENST00000357162 HAP1P54257 671 aaPredicted RBP8.55□□□□□ -1.04
VPS13B-202ENST00000357162 RB1CC1Q8TDY2 1594 aa8.55□□□□□ -1.04
VPS13B-202ENST00000357162 CDK11BP21127 795 aaKnown RBP8.54□□□□□ -1.04
VPS13B-202ENST00000357162 GON4LQ3T8J9 2241 aa8.53□□□□□ -1.04
VPS13B-202ENST00000357162 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
VPS13B-202ENST00000357162 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
VPS13B-202ENST00000357162 MYO15BQ96JP2 1530 aa8.53□□□□□ -1.04
VPS13B-202ENST00000357162 PHLDB1Q86UU1 1377 aa8.52□□□□□ -1.05
VPS13B-202ENST00000357162 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
VPS13B-202ENST00000357162 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.053e-6■■■■□ 20.8
VPS13B-202ENST00000357162 ROCK2O75116 1388 aaKnown RBP8.5□□□□□ -1.05
VPS13B-202ENST00000357162 MTUS2Q5JR59 1369 aa8.49□□□□□ -1.05
VPS13B-202ENST00000357162 CHMP4AQ9BY43 222 aa8.49□□□□□ -1.05
VPS13B-202ENST00000357162 MTERF4Q7Z6M4 381 aaKnown RBP8.49□□□□□ -1.05
VPS13B-202ENST00000357162 NPM2Q86SE8 214 aaKnown RBP8.48□□□□□ -1.05
VPS13B-202ENST00000357162 ZRSR1Q15695 479 aaKnown RBP8.48□□□□□ -1.05
VPS13B-202ENST00000357162 KIF27Q86VH2 1401 aa8.48□□□□□ -1.05
VPS13B-202ENST00000357162 BCL11AQ9H165 835 aa8.48□□□□□ -1.05
VPS13B-202ENST00000357162 BAZ1AQ9NRL2 1556 aaPredicted RBP8.48□□□□□ -1.05
VPS13B-202ENST00000357162 MIER1Q8N108 512 aa8.48□□□□□ -1.05
VPS13B-202ENST00000357162 NBR1Q14596 966 aa8.47□□□□□ -1.05
VPS13B-202ENST00000357162 DDX10Q13206 875 aaKnown RBP8.47□□□□□ -1.05
VPS13B-202ENST00000357162 TCERG1O14776 1098 aaKnown RBP8.46□□□□□ -1.05
VPS13B-202ENST00000357162 PTMAP06454 111 aaKnown RBP8.46□□□□□ -1.05
VPS13B-202ENST00000357162 ZNF326Q5BKZ1 582 aaKnown RBP8.46□□□□□ -1.06
VPS13B-202ENST00000357162 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
VPS13B-202ENST00000357162 MAP1BP46821 2468 aaKnown RBP8.46□□□□□ -1.06
VPS13B-202ENST00000357162 PNNQ9H307 717 aaKnown RBP8.46□□□□□ -1.06
VPS13B-202ENST00000357162 PDE3BQ13370 1112 aa8.46□□□□□ -1.06
VPS13B-202ENST00000357162 SYAP1Q96A49 352 aaPredicted RBP8.45□□□□□ -1.06
VPS13B-202ENST00000357162 CFAP53Q96M91 514 aa8.45□□□□□ -1.06
VPS13B-202ENST00000357162 AAMPQ13685 434 aa8.45□□□□□ -1.06
VPS13B-202ENST00000357162 GBP4Q96PP9 640 aa8.45□□□□□ -1.06
VPS13B-202ENST00000357162 ABCC9O60706 1549 aa8.44□□□□□ -1.06
VPS13B-202ENST00000357162 MSNP26038 577 aaKnown RBP8.44□□□□□ -1.06
VPS13B-202ENST00000357162 SCRIBQ14160 1630 aa8.43□□□□□ -1.06
VPS13B-202ENST00000357162 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
VPS13B-202ENST00000357162 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
VPS13B-202ENST00000357162 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
VPS13B-202ENST00000357162 FANCIQ9NVI1 1328 aa8.43□□□□□ -1.06
VPS13B-202ENST00000357162 PHF14O94880 888 aa8.42□□□□□ -1.06
VPS13B-202ENST00000357162 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
VPS13B-202ENST00000357162 NAP1L5Q96NT1 182 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-202ENST00000357162 TSPY4P0CV99 314 aa8.41□□□□□ -1.06
VPS13B-202ENST00000357162 TSPY10P0CW01 314 aa8.41□□□□□ -1.06
VPS13B-202ENST00000357162 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
VPS13B-202ENST00000357162 MAP7D2Q96T17 732 aa8.41□□□□□ -1.06
VPS13B-202ENST00000357162 LAS1LQ9Y4W2 734 aaKnown RBP8.41□□□□□ -1.06
VPS13B-202ENST00000357162 KIAA2012Q0VF49 1180 aa8.41□□□□□ -1.06
VPS13B-202ENST00000357162 HSCBQ8IWL3 235 aa8.4□□□□□ -1.06
VPS13B-202ENST00000357162 RALBP1Q15311 655 aa8.4□□□□□ -1.06
VPS13B-202ENST00000357162 KNSTRNQ9Y448 316 aa8.4□□□□□ -1.07
VPS13B-202ENST00000357162 FAM9BQ8IZU0 186 aa8.4□□□□□ -1.07
VPS13B-202ENST00000357162 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
VPS13B-202ENST00000357162 DEKP35659 375 aaKnown RBP8.39□□□□□ -1.07
VPS13B-202ENST00000357162 HTATSF1O43719 755 aaKnown RBP8.38□□□□□ -1.07
VPS13B-202ENST00000357162 CCDC34Q96HJ3 373 aa8.38□□□□□ -1.07
VPS13B-202ENST00000357162 CHMP4CQ96CF2 233 aa8.38□□□□□ -1.07
VPS13B-202ENST00000357162 MCCP23508 829 aa8.38□□□□□ -1.07
VPS13B-202ENST00000357162 DNTTIP2Q5QJE6 756 aaKnown RBP8.37□□□□□ -1.07
VPS13B-202ENST00000357162 FTSJ3Q8IY81 847 aaKnown RBP8.37□□□□□ -1.07
VPS13B-202ENST00000357162 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
VPS13B-202ENST00000357162 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
VPS13B-202ENST00000357162 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
VPS13B-202ENST00000357162 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
VPS13B-202ENST00000357162 GOLGA6L3A6NEY3 463 aa8.36□□□□□ -1.07
VPS13B-202ENST00000357162 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
VPS13B-202ENST00000357162 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
VPS13B-202ENST00000357162 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
VPS13B-202ENST00000357162 MAPK8IP3Q9UPT6 1336 aa8.35□□□□□ -1.07
VPS13B-202ENST00000357162 IPO8O15397 1037 aaKnown RBP8.35□□□□□ -1.07
VPS13B-202ENST00000357162 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
VPS13B-202ENST00000357162 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
VPS13B-202ENST00000357162 FMN1Q68DA7 1419 aa8.35□□□□□ -1.07
VPS13B-202ENST00000357162 SETD5Q9C0A6 1442 aa8.35□□□□□ -1.07
VPS13B-202ENST00000357162 EIF3AQ14152 1382 aaKnown RBP8.34□□□□□ -1.07
VPS13B-202ENST00000357162 A0A0U1RQG5 324 aaPredicted RBP8.33□□□□□ -1.08
VPS13B-202ENST00000357162 HSP90AA2PQ14568 343 aaPredicted RBP8.32□□□□□ -1.08
VPS13B-202ENST00000357162 CALRP27797 417 aaKnown RBP8.32□□□□□ -1.08
VPS13B-202ENST00000357162 DHX8Q14562 1220 aaKnown RBP8.32□□□□□ -1.08
VPS13B-202ENST00000357162 ARHGAP35Q9NRY4 1499 aa8.31□□□□□ -1.08
VPS13B-202ENST00000357162 ZBED9Q6R2W3 1325 aa8.31□□□□□ -1.08
VPS13B-202ENST00000357162 CNTRLQ7Z7A1 2325 aa8.3□□□□□ -1.08
VPS13B-202ENST00000357162 TAF3Q5VWG9 929 aa8.3□□□□□ -1.08
VPS13B-202ENST00000357162 GOLGA4Q13439 2230 aaKnown RBP8.3□□□□□ -1.08
VPS13B-202ENST00000357162 GOLGA6L1Q8N7Z2 621 aa8.3□□□□□ -1.08
VPS13B-202ENST00000357162 ATP6V1DQ9Y5K8 247 aa8.3□□□□□ -1.08
VPS13B-202ENST00000357162 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
VPS13B-202ENST00000357162 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
VPS13B-202ENST00000357162 KIF3AQ9Y496 699 aa8.28□□□□□ -1.08
VPS13B-202ENST00000357162 GOLGA6L4A6NEF3 574 aa8.28□□□□□ -1.08
VPS13B-202ENST00000357162 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
VPS13B-202ENST00000357162 STAC3Q96MF2 364 aa8.28□□□□□ -1.08
VPS13B-202ENST00000357162 SMARCA2P51531 1590 aa8.28□□□□□ -1.08
VPS13B-202ENST00000357162 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
VPS13B-202ENST00000357162 HSP90AB1P08238 724 aaKnown RBP8.27□□□□□ -1.09
VPS13B-202ENST00000357162 RWDD1Q9H446 243 aaPredicted RBP8.27□□□□□ -1.09
VPS13B-202ENST00000357162 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms