RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 NCR2O95944 276 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 TIRAPP58753 221 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 KRTAP10-1P60331 282 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 UBE2D3P61077 147 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 UBE2D2P62837 147 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 NDUFA5Q16718 116 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 SMIM15Q7Z3B0 74 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 NEGR1Q7Z3B1 354 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 ATP5L2Q7Z4Y8 100 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 SVBPQ8N300 66 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 RPL39LQ96EH5 51 aaKnown RBP5.02□□□□□ -1.61
PHGDH-225ENST00000641720 RPS10P5Q9NQ39 176 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 URGCP-MRPS24S4R325 110 aa5.02□□□□□ -1.61
PHGDH-225ENST00000641720 TRBV7-3A0A075B6L6 115 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 IGHV3-38A0A0C4DH36 116 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 A0A1B0GW15 77 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 SNAPINO95295 136 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 RAB4AP20338 218 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 RPS10P46783 165 aaKnown RBP5.01□□□□□ -1.61
PHGDH-225ENST00000641720 CCL18P55774 89 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 RPL36AP83881 106 aaKnown RBP5.01□□□□□ -1.61
PHGDH-225ENST00000641720 RASL11AQ6T310 242 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 SH2D6Q7Z4S9 175 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 WFDC10BQ8IUB3 73 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 ATP6V0E2Q8NHE4 81 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 RPL36ALQ969Q0 106 aaKnown RBP5.01□□□□□ -1.61
PHGDH-225ENST00000641720 IMMP2LQ96T52 175 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 UPK3BQ9BT76 320 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 CBY1Q9Y3M2 126 aa5.01□□□□□ -1.61
PHGDH-225ENST00000641720 H7C1H1 209 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 MRPL51Q4U2R6 128 aaKnown RBP5□□□□□ -1.61
PHGDH-225ENST00000641720 FAM104BQ5XKR9 115 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 KCNIP4Q6PIL6 250 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 Q8N3U1 123 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 NRACQ8N912 160 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 DEFB104AQ8WTQ1 72 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 MRAP2Q96G30 205 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 BTF3L4Q96K17 158 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 GTSF1LQ9H1H1 148 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 TMEM242Q9NWH2 141 aa5□□□□□ -1.61
PHGDH-225ENST00000641720 TRAV9-1A0A075B6T8 112 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 TGIF2-C20orf24A0A0A6YYL0 155 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 KRTAP29-1A8MX34 341 aaPredicted RBP4.99□□□□□ -1.61
PHGDH-225ENST00000641720 D6R8Y8 96 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 S100A8P05109 93 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 OR10J3Q5JRS4 329 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 TMEM136Q6ZRR5 245 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 NTM-AS1Q6ZSK4 140 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 CBLN2Q8IUK8 224 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 DNAJC30Q96LL9 226 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 YPEL4Q96NS1 127 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 NIT2Q9NQR4 276 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
PHGDH-225ENST00000641720 NPYP01303 97 aa4.98□□□□□ -1.61
PHGDH-225ENST00000641720 S100PP25815 95 aa4.98□□□□□ -1.61
PHGDH-225ENST00000641720 ELOBQ15370 118 aa4.98□□□□□ -1.61
PHGDH-225ENST00000641720 LELP1Q5T871 98 aa4.98□□□□□ -1.61
PHGDH-225ENST00000641720 Q9H8V8 135 aa4.98□□□□□ -1.61
PHGDH-225ENST00000641720 TRBV6-8A0A0A6YYG3 113 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 TRBV6-5A0A0K0K1A5 114 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 SDHAF1A6NFY7 115 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 SIVA1O15304 175 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 SMR3BP02814 79 aaPredicted RBP4.97□□□□□ -1.61
PHGDH-225ENST00000641720 CKS2P33552 79 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 KRTAP10-4P60372 401 aaPredicted RBP4.97□□□□□ -1.61
PHGDH-225ENST00000641720 DAZ4Q86SG3 579 aaKnown RBP4.97□□□□□ -1.61
PHGDH-225ENST00000641720 FRZBQ92765 325 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 TMEM70Q9BUB7 260 aa4.97□□□□□ -1.61
PHGDH-225ENST00000641720 DAZ3Q9NR90 486 aaKnown RBP4.97□□□□□ -1.61
PHGDH-225ENST00000641720 TRAV8-6A0A0B4J262 113 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 J3QL48 77 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 TSHBP01222 138 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 PCP4P48539 62 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 SUMO2P61956 95 aaKnown RBP4.96□□□□□ -1.62
PHGDH-225ENST00000641720 HAMPP81172 84 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 ST20Q9HBF5 79 aa4.96□□□□□ -1.62
PHGDH-225ENST00000641720 TRBV24-1A0A075B6N3 115 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 IGHV1-24A0A0C4DH33 117 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 SCO1O75880 301 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 IGHV3-30P01768 117 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 IGHV3-33P01772 117 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 HLA-DQA1P01909 254 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 IGHV3-30-3P0DP02 117 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 IGHV3-30-5P0DP03 117 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 POLR2KP53803 58 aaKnown RBP4.95□□□□□ -1.62
PHGDH-225ENST00000641720 GAGE6Q13070 117 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 IQCJQ1A5X6 159 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 KIAA1644Q3SXP7 199 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 CDPF1Q6NVV7 123 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 NIT1Q86X76 327 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 ORMDL3Q8N138 153 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 LINC00528Q8N1L1 170 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 PRELID3AQ96N28 172 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 GNB1LQ9BYB4 327 aa4.95□□□□□ -1.62
PHGDH-225ENST00000641720 C5orf52A6NGY3 159 aa4.94□□□□□ -1.62
PHGDH-225ENST00000641720 I3L3M4 83 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms