RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 GLYATL3Q5SZD4 288 aa2.59□□□□□ -1.99
RFC1-217ENST00000639695 VSTM2AQ8TAG5 236 aa2.59□□□□□ -1.99
RFC1-217ENST00000639695 PATE1Q8WXA2 126 aa2.59□□□□□ -1.99
RFC1-217ENST00000639695 TMEM191AQ9H0A3 160 aa2.59□□□□□ -1.99
RFC1-217ENST00000639695 LSM2Q9Y333 95 aaKnown RBP2.59□□□□□ -1.99
RFC1-217ENST00000639695 SPCS1Q9Y6A9 102 aa2.59□□□□□ -1.99
RFC1-217ENST00000639695 NHSL1Q5SYE7 1610 aa2.59□□□□□ -1.99
RFC1-217ENST00000639695 DSPPQ9NZW4 1301 aa2.59□□□□□ -2
RFC1-217ENST00000639695 CHD3Q12873 2000 aaKnown RBP2.59□□□□□ -2
RFC1-217ENST00000639695 HELZP42694 1942 aaKnown RBP2.58□□□□□ -2
RFC1-217ENST00000639695 TRBV6-7A0A0A0MS04 114 aa2.58□□□□□ -2
RFC1-217ENST00000639695 LOC107986453A0A1B0GWG9 222 aa2.58□□□□□ -2
RFC1-217ENST00000639695 C5orf67F2Z3F1 127 aa2.58□□□□□ -2
RFC1-217ENST00000639695 FXYD1O00168 92 aa2.58□□□□□ -2
RFC1-217ENST00000639695 NPFFO15130 113 aa2.58□□□□□ -2
RFC1-217ENST00000639695 CCL16O15467 120 aa2.58□□□□□ -2
RFC1-217ENST00000639695 YPEL1O60688 119 aa2.58□□□□□ -2
RFC1-217ENST00000639695 SNCGO76070 127 aa2.58□□□□□ -2
RFC1-217ENST00000639695 TRACP01848 142 aa2.58□□□□□ -2
RFC1-217ENST00000639695 ASIPP42127 132 aa2.58□□□□□ -2
RFC1-217ENST00000639695 SNRPGP62308 76 aaKnown RBP2.58□□□□□ -2
RFC1-217ENST00000639695 Q0VG73 95 aa2.58□□□□□ -2
RFC1-217ENST00000639695 CATR1Q13166 79 aa2.58□□□□□ -2
RFC1-217ENST00000639695 MEIG1Q5JSS6 88 aa2.58□□□□□ -2
RFC1-217ENST00000639695 BVES-AS1Q5T3Y7 98 aa2.58□□□□□ -2
RFC1-217ENST00000639695 Q6ZUT4 128 aa2.58□□□□□ -2
RFC1-217ENST00000639695 OR10AG1Q8NH19 301 aa2.58□□□□□ -2
RFC1-217ENST00000639695 CLEC2BQ92478 149 aa2.58□□□□□ -2
RFC1-217ENST00000639695 S100A16Q96FQ6 103 aaKnown RBP2.58□□□□□ -2
RFC1-217ENST00000639695 AQP10Q96PS8 301 aa2.58□□□□□ -2
RFC1-217ENST00000639695 SDF2Q99470 211 aa2.58□□□□□ -2
RFC1-217ENST00000639695 NMES1Q9C002 83 aa2.58□□□□□ -2
RFC1-217ENST00000639695 NPVFQ9HCQ7 196 aa2.58□□□□□ -2
RFC1-217ENST00000639695 CDC42SE1Q9NRR8 79 aa2.58□□□□□ -2
RFC1-217ENST00000639695 TJP1Q07157 1748 aa2.58□□□□□ -2
RFC1-217ENST00000639695 TSC2P49815 1807 aa2.58□□□□□ -2
RFC1-217ENST00000639695 LRP6O75581 1613 aa2.57□□□□□ -2
RFC1-217ENST00000639695 INTS1Q8N201 2190 aaKnown RBP2.57□□□□□ -2
RFC1-217ENST00000639695 SDK1Q7Z5N4 2213 aa2.57□□□□□ -2
RFC1-217ENST00000639695 COL4A1P02462 1669 aa2.57□□□□□ -2
RFC1-217ENST00000639695 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
RFC1-217ENST00000639695 PITX3O75364 302 aa2.57□□□□□ -2
RFC1-217ENST00000639695 FOXA3P55318 350 aaPredicted RBP2.57□□□□□ -2
RFC1-217ENST00000639695 TDRG1Q3Y452 100 aa2.57□□□□□ -2
RFC1-217ENST00000639695 PSMG4Q5JS54 123 aa2.57□□□□□ -2
RFC1-217ENST00000639695 DEFB119Q8N690 84 aa2.57□□□□□ -2
RFC1-217ENST00000639695 Q8TAT8 98 aa2.57□□□□□ -2
RFC1-217ENST00000639695 PPP1R1CQ8WVI7 109 aa2.57□□□□□ -2
RFC1-217ENST00000639695 COPS9Q8WXC6 57 aa2.57□□□□□ -2
RFC1-217ENST00000639695 CST11Q9H112 138 aa2.57□□□□□ -2
RFC1-217ENST00000639695 NRXN3Q9Y4C0 1643 aa2.57□□□□□ -2
RFC1-217ENST00000639695 DLEC1Q9Y238 1755 aa2.56□□□□□ -2
RFC1-217ENST00000639695 SCN3AQ9NY46 2000 aa2.56□□□□□ -2
RFC1-217ENST00000639695 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
RFC1-217ENST00000639695 IGKV3-7A0A075B6H7 116 aa2.56□□□□□ -2
RFC1-217ENST00000639695 A0A1W2PPM0 123 aa2.56□□□□□ -2
RFC1-217ENST00000639695 UQCRQO14949 82 aa2.56□□□□□ -2
RFC1-217ENST00000639695 APOC2P02655 101 aa2.56□□□□□ -2
RFC1-217ENST00000639695 PRH1P02810 166 aa2.56□□□□□ -2
RFC1-217ENST00000639695 SLC25A6P12236 298 aa2.56□□□□□ -2
RFC1-217ENST00000639695 COX7CP15954 63 aa2.56□□□□□ -2
RFC1-217ENST00000639695 DIAPH2-AS1Q14236 149 aa2.56□□□□□ -2
RFC1-217ENST00000639695 MPV17LQ2QL34 196 aa2.56□□□□□ -2
RFC1-217ENST00000639695 Q6AWC8 147 aa2.56□□□□□ -2
RFC1-217ENST00000639695 NAA60Q9H7X0 242 aa2.56□□□□□ -2
RFC1-217ENST00000639695 MPC1Q9Y5U8 109 aa2.56□□□□□ -2
RFC1-217ENST00000639695 DUOX1Q9NRD9 1551 aa2.56□□□□□ -2
RFC1-217ENST00000639695 LY75O60449 1722 aa2.56□□□□□ -2
RFC1-217ENST00000639695 RICTORQ6R327 1708 aa2.56□□□□□ -2
RFC1-217ENST00000639695 NRAPQ86VF7 1730 aa2.56□□□□□ -2
RFC1-217ENST00000639695 BCORQ6W2J9 1755 aa2.56□□□□□ -2
RFC1-217ENST00000639695 CEP192Q8TEP8 1941 aa2.56□□□□□ -2
RFC1-217ENST00000639695 MCM3APO60318 1980 aa2.56□□□□□ -2
RFC1-217ENST00000639695 TRAV1-2A0A0B4J238 106 aa2.55□□□□□ -2
RFC1-217ENST00000639695 MGAMO43451 1857 aa2.55□□□□□ -2
RFC1-217ENST00000639695 KRTDAPP60985 99 aa2.55□□□□□ -2
RFC1-217ENST00000639695 POLEQ07864 2286 aa2.55□□□□□ -2
RFC1-217ENST00000639695 C9orf153Q5TBE3 101 aa2.55□□□□□ -2
RFC1-217ENST00000639695 ARFGEF3Q5TH69 2177 aa2.55□□□□□ -2
RFC1-217ENST00000639695 C10orf111Q8N326 155 aa2.55□□□□□ -2
RFC1-217ENST00000639695 C18orf32Q8TCD1 76 aa2.55□□□□□ -2
RFC1-217ENST00000639695 KIDINS220Q9ULH0 1771 aa2.55□□□□□ -2
RFC1-217ENST00000639695 LINC00312Q9Y6C7 94 aa2.55□□□□□ -2
RFC1-217ENST00000639695 MYOFQ9NZM1 2061 aa2.54□□□□□ -2
RFC1-217ENST00000639695 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
RFC1-217ENST00000639695 CCDC179H3BU77 68 aa2.54□□□□□ -2
RFC1-217ENST00000639695 KLF7O75840 302 aaPredicted RBP2.54□□□□□ -2
RFC1-217ENST00000639695 HBDP02042 147 aa2.54□□□□□ -2
RFC1-217ENST00000639695 LINC00694P0DN24 101 aa2.54□□□□□ -2
RFC1-217ENST00000639695 Q5XG85 94 aa2.54□□□□□ -2
RFC1-217ENST00000639695 KRTAP26-1Q6PEX3 210 aa2.54□□□□□ -2
RFC1-217ENST00000639695 CYP2G1PQ6ZSU1 146 aa2.54□□□□□ -2
RFC1-217ENST00000639695 BAGE3Q86Y29 109 aa2.54□□□□□ -2
RFC1-217ENST00000639695 BAGE2Q86Y30 109 aa2.54□□□□□ -2
RFC1-217ENST00000639695 PPDPFLQ8WWR9 84 aa2.54□□□□□ -2
RFC1-217ENST00000639695 MANBALQ9NQG1 85 aa2.54□□□□□ -2
RFC1-217ENST00000639695 ALPK3Q96L96 1907 aa2.54□□□□□ -2
RFC1-217ENST00000639695 NRXN2Q9P2S2 1712 aa2.54□□□□□ -2
RFC1-217ENST00000639695 ROBO1Q9Y6N7 1651 aa2.53□□□□□ -2
RFC1-217ENST00000639695 C3orf85A0A1B0GTC6 90 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms