RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 NFE4Q86UQ8 179 aa10.4□□□□□ -0.74
CHD1L-211ENST00000639534 PCP2Q8IVA1 136 aa10.4□□□□□ -0.74
CHD1L-211ENST00000639534 ZNF479Q96JC4 524 aa10.4□□□□□ -0.74
CHD1L-211ENST00000639534 TIMM21Q9BVV7 248 aa10.4□□□□□ -0.74
CHD1L-211ENST00000639534 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
CHD1L-211ENST00000639534 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
CHD1L-211ENST00000639534 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
CHD1L-211ENST00000639534 ZNRF2Q8NHG8 242 aa10.39□□□□□ -0.75
CHD1L-211ENST00000639534 CHCHD7Q9BUK0 85 aa10.39□□□□□ -0.75
CHD1L-211ENST00000639534 SORL1Q92673 2214 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 GAGE7O76087 117 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 TAL2Q16559 108 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
CHD1L-211ENST00000639534 SETXQ7Z333 2677 aaKnown RBP10.37□□□□□ -0.75
CHD1L-211ENST00000639534 TCTAP57738 103 aa10.37□□□□□ -0.75
CHD1L-211ENST00000639534 UBE2D3P61077 147 aa10.37□□□□□ -0.75
CHD1L-211ENST00000639534 UBE2D2P62837 147 aa10.37□□□□□ -0.75
CHD1L-211ENST00000639534 DEFB104AQ8WTQ1 72 aa10.37□□□□□ -0.75
CHD1L-211ENST00000639534 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
CHD1L-211ENST00000639534 AMELXQ99217 191 aa10.37□□□□□ -0.75
CHD1L-211ENST00000639534 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 TRAV8-6A0A0B4J262 113 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 MYMXA0A1B0GTQ4 84 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 A6NDN8 102 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 MRPS36P82909 103 aaKnown RBP10.36□□□□□ -0.75
CHD1L-211ENST00000639534 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 GTSF1LQ9H1H1 148 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 ZMAT5Q9UDW3 170 aaKnown RBP10.36□□□□□ -0.75
CHD1L-211ENST00000639534 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
CHD1L-211ENST00000639534 PHLDA1Q8WV24 401 aaPredicted RBP10.35□□□□□ -0.75
CHD1L-211ENST00000639534 CHAC1Q9BUX1 264 aa10.35□□□□□ -0.75
CHD1L-211ENST00000639534 LYRM9A8MSI8 78 aa10.34□□□□□ -0.75
CHD1L-211ENST00000639534 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
CHD1L-211ENST00000639534 X6R8D5 127 aa10.34□□□□□ -0.75
CHD1L-211ENST00000639534 FN1P02751 2386 aaKnown RBP10.34□□□□□ -0.75
CHD1L-211ENST00000639534 HIVEP1P15822 2718 aa10.34□□□□□ -0.75
CHD1L-211ENST00000639534 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 H7C423 109 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 SPATA3Q8NHX4 192 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 Q9UF83 564 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
CHD1L-211ENST00000639534 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 NACAE9PAV3 2078 aa10.33□□□□□ -0.76
CHD1L-211ENST00000639534 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 ZNF25P17030 456 aaPredicted RBP10.32□□□□□ -0.76
CHD1L-211ENST00000639534 GAGE1Q13065 139 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 GAGE4Q13068 117 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 GAGE5Q13069 117 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 FHL2Q14192 279 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 OPRPNQ99935 248 aaPredicted RBP10.32□□□□□ -0.76
CHD1L-211ENST00000639534 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 WNK1Q9H4A3 2382 aa10.32□□□□□ -0.76
CHD1L-211ENST00000639534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.31□□□□□ -0.76
CHD1L-211ENST00000639534 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
CHD1L-211ENST00000639534 TMEM223A0PJW6 202 aa10.31□□□□□ -0.76
CHD1L-211ENST00000639534 IGKV2-29A2NJV5 120 aaPredicted RBP10.31□□□□□ -0.76
CHD1L-211ENST00000639534 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
CHD1L-211ENST00000639534 LEPROTO15243 131 aa10.31□□□□□ -0.76
CHD1L-211ENST00000639534 KRTAP24-1Q3LI83 254 aa10.31□□□□□ -0.76
CHD1L-211ENST00000639534 A0A0J9YXV3 536 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 MIFP14174 115 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
CHD1L-211ENST00000639534 EMP1P54849 157 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 C3orf56Q8N813 242 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 TMEM243Q9BU79 118 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 TM2D2Q9BX73 214 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 TTTY13Q9BZ97 58 aa10.3□□□□□ -0.76
CHD1L-211ENST00000639534 H3BRM9 83 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 TAX1BP3O14907 124 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 UBE2L6O14933 153 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
CHD1L-211ENST00000639534 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 CEND1Q8N111 149 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 FAM104AQ969W3 186 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 CUBNO60494 3623 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
CHD1L-211ENST00000639534 LINC00694P0DN24 101 aa10.28□□□□□ -0.76
CHD1L-211ENST00000639534 GCSHP23434 173 aa10.28□□□□□ -0.76
CHD1L-211ENST00000639534 TIRAPP58753 221 aa10.28□□□□□ -0.76
CHD1L-211ENST00000639534 Q6ZUT4 128 aa10.28□□□□□ -0.76
CHD1L-211ENST00000639534 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
CHD1L-211ENST00000639534 J3QQQ9 107 aa10.27□□□□□ -0.77
CHD1L-211ENST00000639534 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
CHD1L-211ENST00000639534 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
CHD1L-211ENST00000639534 PTTG1IPP53801 180 aa10.27□□□□□ -0.77
CHD1L-211ENST00000639534 DEFB135Q30KP9 77 aa10.27□□□□□ -0.77
CHD1L-211ENST00000639534 CEMP1Q6PRD7 247 aaPredicted RBP10.27□□□□□ -0.77
CHD1L-211ENST00000639534 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms