RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MAP1LC3AQ9H492 121 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 TP53TG1Q9Y2A0 90 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 MPV17L2Q567V2 206 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 ZFAND2AQ8N6M9 145 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 NRACQ8N912 160 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 KIR2DL5BQ8NHK3 375 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
LINC00550-201ENST00000629293 H0Y8G0 127 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 Q6ZQT7 251 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 Q6ZTC4 211 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 OR8A1Q8NGG7 326 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 IFI27L1Q96BM0 104 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 NXT2Q9NPJ8 142 aaKnown RBP3.47□□□□□ -1.85
LINC00550-201ENST00000629293 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 TAX1BP3O14907 124 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 FCER1GP30273 86 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 CACNG7P62955 275 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 Q6ZVH6 145 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 STHQ8IWL8 128 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 Q8N8P6 123 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 IGHV3OR16-12A0A075B7B8 117 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 TRBV7-9A0A0J9YWB2 115 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 ZNF688P0C7X2 276 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 HTN3P15516 51 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 GATA1P15976 413 aaPredicted RBP3.46□□□□□ -1.86
LINC00550-201ENST00000629293 FXYD7P58549 80 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 BOD1L2Q8IYS8 172 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 ZNF738Q8NE65 137 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 SMPXQ9UHP9 88 aa3.46□□□□□ -1.86
LINC00550-201ENST00000629293 TIMM8BQ9Y5J9 83 aaPredicted RBP3.46□□□□□ -1.86
LINC00550-201ENST00000629293 KNCNA6PVL3 124 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 NUDT3O95989 172 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 EVI2AP22794 236 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 UBE2DNLQ8IWF7 75 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 LINC00477Q96M19 166 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 CCL25O15444 150 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 NXPH4O95158 308 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 LEPP41159 167 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 MRAP2Q96G30 205 aa3.45□□□□□ -1.86
LINC00550-201ENST00000629293 TRAV21A0A0B4J279 112 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 H3BVH4 76 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 SIVA1O15304 175 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 PSMG4Q5JS54 123 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 POM121L12Q8N7R1 296 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 OR10J6PQ8NGY7 276 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 XCL2Q9UBD3 114 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 HHLA3Q9XRX5 114 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 DEFB131BA0A096LNP1 70 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 K7EMT4 169 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 HLA-DRB4P13762 266 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 SEC11AP67812 179 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 Q8N1X5 172 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 APLNQ9ULZ1 77 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 HLA-DRB4X5D2U9 266 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 TRAV26-2A0A0B4J265 109 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 KLLNB2CW77 178 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 ATP5LO75964 103 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 RBMY1A1P0DJD3 496 aaKnown RBP3.44□□□□□ -1.86
LINC00550-201ENST00000629293 RBMY1CP0DJD4 496 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 DEFB1P60022 68 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
LINC00550-201ENST00000629293 SMIM15Q7Z3B0 74 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 CELA1Q9UNI1 258 aa3.44□□□□□ -1.86
LINC00550-201ENST00000629293 M0R381 172 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 HSD52Q0P140 79 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 LAGE3Q14657 143 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 TMEM97Q5BJF2 176 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 SPANXN1Q5VSR9 72 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 DCANP1Q8TF63 244 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 C18orf15Q96N68 181 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 TRAV10A0A0B4J240 114 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 K7EP13 123 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 SMIM17P0DL12 118 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 RNASE3P12724 160 aaKnown RBP3.43□□□□□ -1.86
LINC00550-201ENST00000629293 ASIPP42127 132 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 PCP2Q8IVA1 136 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 Q8NAQ8 132 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 RASL10AQ92737 203 aa3.43□□□□□ -1.86
LINC00550-201ENST00000629293 C11orf68Q9H3H3 251 aaKnown RBP3.43□□□□□ -1.86
LINC00550-201ENST00000629293 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 F6UB75 175 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 SAMD13Q5VXD3 122 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 ODF3Q96PU9 254 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 C20orf78Q9BR46 151 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 DPH3P1Q9H4G8 78 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 KIF25-AS1Q9Y6Z4 181 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 K7EMI3 77 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 DPM2O94777 84 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 IGKCP01834 107 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 CMC4P56277 68 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms