RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C11orf52Q96A22 123 aa12.02□□□□□ -0.49
SMN2-215ENST00000628696 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
SMN2-215ENST00000628696 XKRY2A2RUG3 117 aa12.01□□□□□ -0.49
SMN2-215ENST00000628696 F2Z2F3 143 aa12.01□□□□□ -0.49
SMN2-215ENST00000628696 COTL1Q14019 142 aa12.01□□□□□ -0.49
SMN2-215ENST00000628696 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
SMN2-215ENST00000628696 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
SMN2-215ENST00000628696 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
SMN2-215ENST00000628696 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
SMN2-215ENST00000628696 PHOX2AO14813 284 aa12□□□□□ -0.49
SMN2-215ENST00000628696 IFNA1P01562 189 aa12□□□□□ -0.49
SMN2-215ENST00000628696 GNG4P50150 75 aa12□□□□□ -0.49
SMN2-215ENST00000628696 EIF5AP63241 154 aaKnown RBP12□□□□□ -0.49
SMN2-215ENST00000628696 COX6A2Q02221 97 aa12□□□□□ -0.49
SMN2-215ENST00000628696 CFAP161Q6P656 301 aa12□□□□□ -0.49
SMN2-215ENST00000628696 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
SMN2-215ENST00000628696 HMSDA8MTL9 139 aa11.99□□□□□ -0.49
SMN2-215ENST00000628696 NTF3P20783 257 aa11.99□□□□□ -0.49
SMN2-215ENST00000628696 HIGD2BQ4VC39 106 aa11.99□□□□□ -0.49
SMN2-215ENST00000628696 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
SMN2-215ENST00000628696 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
SMN2-215ENST00000628696 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
SMN2-215ENST00000628696 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
SMN2-215ENST00000628696 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
SMN2-215ENST00000628696 TWIST1Q15672 202 aa11.97□□□□□ -0.49
SMN2-215ENST00000628696 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.49
SMN2-215ENST00000628696 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
SMN2-215ENST00000628696 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
SMN2-215ENST00000628696 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
SMN2-215ENST00000628696 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
SMN2-215ENST00000628696 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
SMN2-215ENST00000628696 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
SMN2-215ENST00000628696 CHCHD10Q8WYQ3 142 aaPredicted RBP11.95□□□□□ -0.5
SMN2-215ENST00000628696 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
SMN2-215ENST00000628696 BIN3Q9NQY0 253 aa11.95□□□□□ -0.5
SMN2-215ENST00000628696 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SMN2-215ENST00000628696 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
SMN2-215ENST00000628696 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
SMN2-215ENST00000628696 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
SMN2-215ENST00000628696 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
SMN2-215ENST00000628696 STPG4Q8N801 248 aa11.93□□□□□ -0.5
SMN2-215ENST00000628696 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
SMN2-215ENST00000628696 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
SMN2-215ENST00000628696 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
SMN2-215ENST00000628696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SMN2-215ENST00000628696 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SMN2-215ENST00000628696 PDE6DO43924 150 aa11.92□□□□□ -0.5
SMN2-215ENST00000628696 CTRLP40313 264 aa11.92□□□□□ -0.5
SMN2-215ENST00000628696 Q6ZNX1 250 aa11.92□□□□□ -0.5
SMN2-215ENST00000628696 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
SMN2-215ENST00000628696 TNXBP22105 4242 aa11.91□□□□□ -0.5
SMN2-215ENST00000628696 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
SMN2-215ENST00000628696 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
SMN2-215ENST00000628696 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
SMN2-215ENST00000628696 NCR2O95944 276 aa11.89□□□□□ -0.51
SMN2-215ENST00000628696 APCSP02743 223 aa11.89□□□□□ -0.51
SMN2-215ENST00000628696 ODF1Q14990 250 aa11.89□□□□□ -0.51
SMN2-215ENST00000628696 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
SMN2-215ENST00000628696 A0A096LNI7 61 aa11.88□□□□□ -0.51
SMN2-215ENST00000628696 FGF6P10767 208 aa11.88□□□□□ -0.51
SMN2-215ENST00000628696 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
SMN2-215ENST00000628696 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
SMN2-215ENST00000628696 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
SMN2-215ENST00000628696 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
SMN2-215ENST00000628696 H7C423 109 aa11.87□□□□□ -0.51
SMN2-215ENST00000628696 BCL2P10415 239 aa11.87□□□□□ -0.51
SMN2-215ENST00000628696 XCL1P47992 114 aa11.87□□□□□ -0.51
SMN2-215ENST00000628696 FOXA3P55318 350 aaPredicted RBP11.87□□□□□ -0.51
SMN2-215ENST00000628696 FOXI1Q12951 378 aa11.87□□□□□ -0.51
SMN2-215ENST00000628696 LRP2P98164 4655 aa11.86□□□□□ -0.51
SMN2-215ENST00000628696 SDHAF1A6NFY7 115 aa11.86□□□□□ -0.51
SMN2-215ENST00000628696 LINC00526Q96FQ7 95 aa11.86□□□□□ -0.51
SMN2-215ENST00000628696 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
SMN2-215ENST00000628696 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
SMN2-215ENST00000628696 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
SMN2-215ENST00000628696 BTF3L4Q96K17 158 aa11.85□□□□□ -0.51
SMN2-215ENST00000628696 K7EN84 100 aa11.84□□□□□ -0.51
SMN2-215ENST00000628696 PMCHP20382 165 aa11.84□□□□□ -0.51
SMN2-215ENST00000628696 TEX261Q6UWH6 196 aa11.84□□□□□ -0.51
SMN2-215ENST00000628696 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
SMN2-215ENST00000628696 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
SMN2-215ENST00000628696 I3L3M4 83 aa11.83□□□□□ -0.52
SMN2-215ENST00000628696 CCL25O15444 150 aa11.83□□□□□ -0.52
SMN2-215ENST00000628696 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
SMN2-215ENST00000628696 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
SMN2-215ENST00000628696 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
SMN2-215ENST00000628696 REG3GQ6UW15 175 aa11.82□□□□□ -0.52
SMN2-215ENST00000628696 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
SMN2-215ENST00000628696 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
SMN2-215ENST00000628696 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
SMN2-215ENST00000628696 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
SMN2-215ENST00000628696 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
SMN2-215ENST00000628696 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
SMN2-215ENST00000628696 SS18Q15532 418 aa11.8□□□□□ -0.52
SMN2-215ENST00000628696 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
SMN2-215ENST00000628696 TMEM242Q9NWH2 141 aa11.79□□□□□ -0.52
SMN2-215ENST00000628696 KRTAP10-8P60410 259 aa11.78□□□□□ -0.52
SMN2-215ENST00000628696 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
SMN2-215ENST00000628696 Q6ZRP5 223 aa11.78□□□□□ -0.52
SMN2-215ENST00000628696 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms