RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 DAZ3Q9NR90 486 aaKnown RBP13.6□□□□□ -0.23
R3HCC1-210ENST00000625275 SDHAF1A6NFY7 115 aa13.59□□□□□ -0.23
R3HCC1-210ENST00000625275 COLCA2A8K830 154 aa13.59□□□□□ -0.23
R3HCC1-210ENST00000625275 TNFRSF6BO95407 300 aa13.59□□□□□ -0.23
R3HCC1-210ENST00000625275 TIRAPP58753 221 aa13.59□□□□□ -0.23
R3HCC1-210ENST00000625275 PRELID3AQ96N28 172 aa13.59□□□□□ -0.23
R3HCC1-210ENST00000625275 BTF3P20290 206 aaKnown RBP13.58□□□□□ -0.24
R3HCC1-210ENST00000625275 SUMO2P61956 95 aaKnown RBP13.58□□□□□ -0.24
R3HCC1-210ENST00000625275 TMEM70Q9BUB7 260 aa13.58□□□□□ -0.24
R3HCC1-210ENST00000625275 TRAPPC1Q9Y5R8 145 aa13.58□□□□□ -0.24
R3HCC1-210ENST00000625275 FABP9Q0Z7S8 132 aa13.57□□□□□ -0.24
R3HCC1-210ENST00000625275 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.57□□□□□ -0.24
R3HCC1-210ENST00000625275 PHOX2AO14813 284 aa13.56□□□□□ -0.24
R3HCC1-210ENST00000625275 POLR2KP53803 58 aaKnown RBP13.56□□□□□ -0.24
R3HCC1-210ENST00000625275 DEFB104AQ8WTQ1 72 aa13.56□□□□□ -0.24
R3HCC1-210ENST00000625275 SIVA1O15304 175 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 CDK2AP2O75956 126 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 SPATA12Q7Z6I5 190 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 LAMTOR2Q9Y2Q5 125 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 RYR1P21817 5038 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 TRBV27A0A0K0K1C4 114 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 LELP1Q5T871 98 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 NTM-AS1Q6ZSK4 140 aa13.55□□□□□ -0.24
R3HCC1-210ENST00000625275 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
R3HCC1-210ENST00000625275 RAB5AP20339 215 aa13.54□□□□□ -0.24
R3HCC1-210ENST00000625275 I3L3M4 83 aa13.53□□□□□ -0.24
R3HCC1-210ENST00000625275 ALKBH7Q9BT30 221 aaPredicted RBP13.53□□□□□ -0.24
R3HCC1-210ENST00000625275 VCYO14598 125 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 PMCHP20382 165 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 RPL32P62910 135 aaKnown RBP13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 COTL1Q14019 142 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 TMEM97Q5BJF2 176 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 WFDC10BQ8IUB3 73 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 SMIM2Q9BVW6 85 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 HSPG2P98160 4391 aa13.52□□□□□ -0.25
R3HCC1-210ENST00000625275 MAP1LC3AQ9H492 121 aa13.51□□□□□ -0.25
R3HCC1-210ENST00000625275 PRSS47A8MTI9 375 aa13.5□□□□□ -0.25
R3HCC1-210ENST00000625275 TSHBP01222 138 aa13.5□□□□□ -0.25
R3HCC1-210ENST00000625275 Q6ZRN7 208 aaPredicted RBP13.5□□□□□ -0.25
R3HCC1-210ENST00000625275 KRTAP4-5Q9BYR2 181 aa13.5□□□□□ -0.25
R3HCC1-210ENST00000625275 LRP1BQ9NZR2 4599 aa13.5□□□□□ -0.25
R3HCC1-210ENST00000625275 TRAV8-6A0A0B4J262 113 aa13.49□□□□□ -0.25
R3HCC1-210ENST00000625275 LOC389332A0A1B0GUA5 103 aa13.49□□□□□ -0.25
R3HCC1-210ENST00000625275 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
R3HCC1-210ENST00000625275 IQCJQ1A5X6 159 aa13.49□□□□□ -0.25
R3HCC1-210ENST00000625275 TRBV25-1A0A075B6N4 114 aa13.48□□□□□ -0.25
R3HCC1-210ENST00000625275 IGHV1-24A0A0C4DH33 117 aa13.48□□□□□ -0.25
R3HCC1-210ENST00000625275 TRGC2P03986 189 aa13.48□□□□□ -0.25
R3HCC1-210ENST00000625275 AMTP48728 403 aa13.48□□□□□ -0.25
R3HCC1-210ENST00000625275 KIR2DL4Q99706 377 aa13.48□□□□□ -0.25
R3HCC1-210ENST00000625275 MAPKAPK5-AS1Q8N8E1 139 aa13.47□□□□□ -0.25
R3HCC1-210ENST00000625275 FCER1GP30273 86 aa13.46□□□□□ -0.25
R3HCC1-210ENST00000625275 CHCHD5Q9BSY4 110 aa13.46□□□□□ -0.25
R3HCC1-210ENST00000625275 TMEM243Q9BU79 118 aa13.46□□□□□ -0.25
R3HCC1-210ENST00000625275 IFI27P40305 119 aaPredicted RBP13.45□□□□□ -0.26
R3HCC1-210ENST00000625275 Q8N3U1 123 aa13.45□□□□□ -0.26
R3HCC1-210ENST00000625275 Q8N8P6 123 aa13.45□□□□□ -0.26
R3HCC1-210ENST00000625275 CHCHD7Q9BUK0 85 aa13.45□□□□□ -0.26
R3HCC1-210ENST00000625275 TCAPO15273 167 aa13.44□□□□□ -0.26
R3HCC1-210ENST00000625275 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
R3HCC1-210ENST00000625275 NIT1Q86X76 327 aa13.44□□□□□ -0.26
R3HCC1-210ENST00000625275 C18orf32Q8TCD1 76 aa13.44□□□□□ -0.26
R3HCC1-210ENST00000625275 NXT2Q9NPJ8 142 aaKnown RBP13.44□□□□□ -0.26
R3HCC1-210ENST00000625275 TRAV9-2A0A087WT02 112 aa13.43□□□□□ -0.26
R3HCC1-210ENST00000625275 ESDP10768 282 aa13.43□□□□□ -0.26
R3HCC1-210ENST00000625275 NFE4Q86UQ8 179 aa13.43□□□□□ -0.26
R3HCC1-210ENST00000625275 ABCA13Q86UQ4 5058 aa13.43□□□□□ -0.26
R3HCC1-210ENST00000625275 GAGE6Q13070 117 aa13.42□□□□□ -0.26
R3HCC1-210ENST00000625275 LINC01556Q5JQF7 62 aa13.42□□□□□ -0.26
R3HCC1-210ENST00000625275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.42□□□□□ -0.26
R3HCC1-210ENST00000625275 IGKV2-29A2NJV5 120 aaPredicted RBP13.42□□□□□ -0.26
R3HCC1-210ENST00000625275 K7EP13 123 aa13.42□□□□□ -0.26
R3HCC1-210ENST00000625275 PRSS3P2Q8NHM4 247 aa13.42□□□□□ -0.26
R3HCC1-210ENST00000625275 TMEM262E9PQX1 116 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 EREGO14944 169 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 IGHV3-30P01768 117 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 IGHV3-33P01772 117 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 IGHV3-30-3P0DP02 117 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 IGHV3-30-5P0DP03 117 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 MPV17L2Q567V2 206 aa13.41□□□□□ -0.26
R3HCC1-210ENST00000625275 APOBP04114 4563 aaKnown RBP13.4□□□□□ -0.26
R3HCC1-210ENST00000625275 UBE2L6O14933 153 aa13.4□□□□□ -0.26
R3HCC1-210ENST00000625275 A0A087WX48 190 aa13.39□□□□□ -0.27
R3HCC1-210ENST00000625275 K7EMI3 77 aa13.39□□□□□ -0.27
R3HCC1-210ENST00000625275 Q8N1X5 172 aa13.39□□□□□ -0.27
R3HCC1-210ENST00000625275 Q8N976 141 aa13.39□□□□□ -0.27
R3HCC1-210ENST00000625275 PKIAP61925 76 aa13.38□□□□□ -0.27
R3HCC1-210ENST00000625275 C20orf203Q8NBC4 194 aa13.38□□□□□ -0.27
R3HCC1-210ENST00000625275 DNAH5Q8TE73 4624 aa13.38□□□□□ -0.27
R3HCC1-210ENST00000625275 LINC01546A6NGU7 62 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 H7C423 109 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 RBX1P62877 108 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 LAGE3Q14657 143 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 CDPF1Q6NVV7 123 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 PGPEP1Q9NXJ5 209 aa13.37□□□□□ -0.27
R3HCC1-210ENST00000625275 FGF6P10767 208 aa13.36□□□□□ -0.27
R3HCC1-210ENST00000625275 ORMDL2Q53FV1 153 aa13.36□□□□□ -0.27
R3HCC1-210ENST00000625275 FA2HQ7L5A8 372 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms