RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 C11orf52Q96A22 123 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 MANBALQ9NQG1 85 aa12.02□□□□□ -0.49
SMN1-211ENST00000625245 XKRY2A2RUG3 117 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 F2Z2F3 143 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 COTL1Q14019 142 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
SMN1-211ENST00000625245 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
SMN1-211ENST00000625245 PHOX2AO14813 284 aa12□□□□□ -0.49
SMN1-211ENST00000625245 IFNA1P01562 189 aa12□□□□□ -0.49
SMN1-211ENST00000625245 GNG4P50150 75 aa12□□□□□ -0.49
SMN1-211ENST00000625245 EIF5AP63241 154 aaKnown RBP12□□□□□ -0.49
SMN1-211ENST00000625245 COX6A2Q02221 97 aa12□□□□□ -0.49
SMN1-211ENST00000625245 CFAP161Q6P656 301 aa12□□□□□ -0.49
SMN1-211ENST00000625245 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
SMN1-211ENST00000625245 HMSDA8MTL9 139 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 NTF3P20783 257 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 HIGD2BQ4VC39 106 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
SMN1-211ENST00000625245 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
SMN1-211ENST00000625245 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
SMN1-211ENST00000625245 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
SMN1-211ENST00000625245 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
SMN1-211ENST00000625245 TWIST1Q15672 202 aa11.97□□□□□ -0.49
SMN1-211ENST00000625245 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.49
SMN1-211ENST00000625245 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
SMN1-211ENST00000625245 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
SMN1-211ENST00000625245 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
SMN1-211ENST00000625245 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 CHCHD10Q8WYQ3 142 aaPredicted RBP11.95□□□□□ -0.5
SMN1-211ENST00000625245 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 BIN3Q9NQY0 253 aa11.95□□□□□ -0.5
SMN1-211ENST00000625245 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SMN1-211ENST00000625245 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
SMN1-211ENST00000625245 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
SMN1-211ENST00000625245 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
SMN1-211ENST00000625245 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
SMN1-211ENST00000625245 STPG4Q8N801 248 aa11.93□□□□□ -0.5
SMN1-211ENST00000625245 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
SMN1-211ENST00000625245 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
SMN1-211ENST00000625245 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SMN1-211ENST00000625245 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SMN1-211ENST00000625245 PDE6DO43924 150 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 CTRLP40313 264 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 Q6ZNX1 250 aa11.92□□□□□ -0.5
SMN1-211ENST00000625245 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
SMN1-211ENST00000625245 TNXBP22105 4242 aa11.91□□□□□ -0.5
SMN1-211ENST00000625245 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
SMN1-211ENST00000625245 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
SMN1-211ENST00000625245 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
SMN1-211ENST00000625245 NCR2O95944 276 aa11.89□□□□□ -0.51
SMN1-211ENST00000625245 APCSP02743 223 aa11.89□□□□□ -0.51
SMN1-211ENST00000625245 ODF1Q14990 250 aa11.89□□□□□ -0.51
SMN1-211ENST00000625245 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
SMN1-211ENST00000625245 A0A096LNI7 61 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 FGF6P10767 208 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
SMN1-211ENST00000625245 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
SMN1-211ENST00000625245 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
SMN1-211ENST00000625245 H7C423 109 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 BCL2P10415 239 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 XCL1P47992 114 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 FOXA3P55318 350 aaPredicted RBP11.87□□□□□ -0.51
SMN1-211ENST00000625245 FOXI1Q12951 378 aa11.87□□□□□ -0.51
SMN1-211ENST00000625245 LRP2P98164 4655 aa11.86□□□□□ -0.51
SMN1-211ENST00000625245 SDHAF1A6NFY7 115 aa11.86□□□□□ -0.51
SMN1-211ENST00000625245 LINC00526Q96FQ7 95 aa11.86□□□□□ -0.51
SMN1-211ENST00000625245 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 BTF3L4Q96K17 158 aa11.85□□□□□ -0.51
SMN1-211ENST00000625245 K7EN84 100 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 PMCHP20382 165 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 TEX261Q6UWH6 196 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
SMN1-211ENST00000625245 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
SMN1-211ENST00000625245 I3L3M4 83 aa11.83□□□□□ -0.52
SMN1-211ENST00000625245 CCL25O15444 150 aa11.83□□□□□ -0.52
SMN1-211ENST00000625245 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
SMN1-211ENST00000625245 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 REG3GQ6UW15 175 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 PKIGQ9Y2B9 76 aa11.82□□□□□ -0.52
SMN1-211ENST00000625245 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
SMN1-211ENST00000625245 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
SMN1-211ENST00000625245 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
SMN1-211ENST00000625245 SS18Q15532 418 aa11.8□□□□□ -0.52
SMN1-211ENST00000625245 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
SMN1-211ENST00000625245 TMEM242Q9NWH2 141 aa11.79□□□□□ -0.52
SMN1-211ENST00000625245 KRTAP10-8P60410 259 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 Q6ZRP5 223 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms