RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 URGCP-MRPS24S4R325 110 aa8.74□□□□□ -1.01
SNX1-214ENST00000625244 GAGE12JA6NER3 117 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 IGLC6P0CF74 106 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 SSTP61278 116 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 PNRC1Q12796 327 aaPredicted RBP8.73□□□□□ -1.01
SNX1-214ENST00000625244 GAGE1Q13065 139 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 GAGE4Q13068 117 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 GAGE5Q13069 117 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 GAGE13Q4V321 117 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 ZFP2Q6ZN57 461 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 OR10G8Q8NGN5 311 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 Q9UF83 564 aa8.73□□□□□ -1.01
SNX1-214ENST00000625244 MUC21A0A0G2JKD1 596 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 MUC21A0A140T8X8 626 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 TRGC1P0CF51 173 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 LYZL1Q6UWQ5 148 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 DPH3Q96FX2 82 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 C1orf43Q9BWL3 253 aa8.72□□□□□ -1.01
SNX1-214ENST00000625244 A0A087WWC5 75 aa8.71□□□□□ -1.02
SNX1-214ENST00000625244 F8W036 122 aa8.71□□□□□ -1.02
SNX1-214ENST00000625244 CHTF8P0CG12 524 aa8.71□□□□□ -1.02
SNX1-214ENST00000625244 CTRLP40313 264 aa8.71□□□□□ -1.02
SNX1-214ENST00000625244 PRR3P79522 188 aaKnown RBP8.71□□□□□ -1.02
SNX1-214ENST00000625244 TSKUQ8WUA8 353 aa8.71□□□□□ -1.02
SNX1-214ENST00000625244 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
SNX1-214ENST00000625244 A0A087WWL8 130 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 LINC00862A6NCI5 91 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 PPP1R2P9O14990 202 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 TWIST1Q15672 202 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 ZNF56Q15929 161 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 JPT2Q9H910 190 aa8.7□□□□□ -1.02
SNX1-214ENST00000625244 TMEM218A2RU14 115 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 HIGD1CA8MV81 97 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 F5H697 171 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 HLA-DQA1P01909 254 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 MT-ND4LP03901 98 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 NTF3P20783 257 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 Q0VG73 95 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 ENHOQ6UWT2 76 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 PGLYRP4Q96LB8 373 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 V9GYV3 84 aa8.69□□□□□ -1.02
SNX1-214ENST00000625244 A0A087WX48 190 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 MGPP08493 103 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 ELOBQ15370 118 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 C14orf178Q8N769 122 aaPredicted RBP8.68□□□□□ -1.02
SNX1-214ENST00000625244 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 SEC11CQ9BY50 192 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 NAT8BQ9UHF3 227 aa8.68□□□□□ -1.02
SNX1-214ENST00000625244 A0A1B0GUT8 65 aa8.67□□□□□ -1.02
SNX1-214ENST00000625244 RAB4BP61018 213 aa8.67□□□□□ -1.02
SNX1-214ENST00000625244 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
SNX1-214ENST00000625244 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
SNX1-214ENST00000625244 ANAPC16Q96DE5 110 aa8.67□□□□□ -1.02
SNX1-214ENST00000625244 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
SNX1-214ENST00000625244 CRCT1Q9UGL9 99 aa8.67□□□□□ -1.02
SNX1-214ENST00000625244 H7C1H1 209 aa8.66□□□□□ -1.02
SNX1-214ENST00000625244 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
SNX1-214ENST00000625244 RIGQ13278 110 aa8.66□□□□□ -1.02
SNX1-214ENST00000625244 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
SNX1-214ENST00000625244 UFSP1Q6NVU6 142 aa8.66□□□□□ -1.02
SNX1-214ENST00000625244 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
SNX1-214ENST00000625244 TRBV10-1A0A0K0K1A3 114 aa8.65□□□□□ -1.02
SNX1-214ENST00000625244 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
SNX1-214ENST00000625244 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
SNX1-214ENST00000625244 SMIM27A0A1W2PRY6 76 aa8.64□□□□□ -1.03
SNX1-214ENST00000625244 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
SNX1-214ENST00000625244 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
SNX1-214ENST00000625244 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
SNX1-214ENST00000625244 A0A1B0GW15 77 aa8.63□□□□□ -1.03
SNX1-214ENST00000625244 CRPP02741 224 aa8.63□□□□□ -1.03
SNX1-214ENST00000625244 S100A8P05109 93 aa8.63□□□□□ -1.03
SNX1-214ENST00000625244 ADCYAP1P18509 176 aa8.63□□□□□ -1.03
SNX1-214ENST00000625244 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX1-214ENST00000625244 KCNIP4Q6PIL6 250 aa8.63□□□□□ -1.03
SNX1-214ENST00000625244 KRTAP26-1Q6PEX3 210 aa8.62□□□□□ -1.03
SNX1-214ENST00000625244 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
SNX1-214ENST00000625244 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
SNX1-214ENST00000625244 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
SNX1-214ENST00000625244 SLPIP03973 132 aa8.61□□□□□ -1.03
SNX1-214ENST00000625244 TMEM191AQ9H0A3 160 aa8.61□□□□□ -1.03
SNX1-214ENST00000625244 S100PP25815 95 aa8.6□□□□□ -1.03
SNX1-214ENST00000625244 CAMPP49913 170 aa8.6□□□□□ -1.03
SNX1-214ENST00000625244 HBBP68871 147 aa8.6□□□□□ -1.03
SNX1-214ENST00000625244 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
SNX1-214ENST00000625244 RASL11AQ6T310 242 aa8.6□□□□□ -1.03
SNX1-214ENST00000625244 CLRN3Q8NCR9 226 aa8.6□□□□□ -1.03
SNX1-214ENST00000625244 CARHSP1Q9Y2V2 147 aaKnown RBP8.6□□□□□ -1.03
SNX1-214ENST00000625244 APOC3P02656 99 aa8.59□□□□□ -1.03
SNX1-214ENST00000625244 RHEBQ15382 184 aa8.59□□□□□ -1.03
SNX1-214ENST00000625244 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
SNX1-214ENST00000625244 MRPL54Q6P161 138 aaKnown RBP8.59□□□□□ -1.03
SNX1-214ENST00000625244 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms