RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 C19orf73Q9NVV2 129 aa14.27□□□□□ -0.13
PCDHB11-202ENST00000624887 IGHV3-53P01767 116 aa14.26□□□□□ -0.13
PCDHB11-202ENST00000624887 C11orf86A6NJI1 115 aa14.25□□□□□ -0.13
PCDHB11-202ENST00000624887 OR5A1Q8NGJ0 315 aa14.25□□□□□ -0.13
PCDHB11-202ENST00000624887 NIPBLQ6KC79 2804 aaeCLIP14.25□□□□□ -0.13
PCDHB11-202ENST00000624887 GIG44P09565 113 aaPredicted RBP14.24□□□□□ -0.13
PCDHB11-202ENST00000624887 DNAJC30Q96LL9 226 aa14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 Q9UF83 564 aa14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 HIVEP1P15822 2718 aa14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 G3V4G9 280 aa14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 TMEM263Q8WUH6 116 aaKnown RBP14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 PRADC1Q9BSG0 188 aa14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 WFDC10AQ9H1F0 79 aa14.23□□□□□ -0.13
PCDHB11-202ENST00000624887 MYMXA0A1B0GTQ4 84 aa14.22□□□□□ -0.13
PCDHB11-202ENST00000624887 EMP1P54849 157 aa14.22□□□□□ -0.13
PCDHB11-202ENST00000624887 OPRPNQ99935 248 aaPredicted RBP14.22□□□□□ -0.13
PCDHB11-202ENST00000624887 PYGO1Q9Y3Y4 419 aa14.22□□□□□ -0.13
PCDHB11-202ENST00000624887 IGLV4-3A0A075B6K6 122 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 TRGV1A0A0A0MS02 117 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 H3BUT2 72 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 GCSHP23434 173 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 HERVK_113P61574 105 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 TAL2Q16559 108 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 ZNRF2Q8NHG8 242 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 A0A1W2PPM0 123 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 NFE4Q86UQ8 179 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 TM2D2Q9BX73 214 aa14.2□□□□□ -0.14
PCDHB11-202ENST00000624887 PF4P02776 101 aa14.19□□□□□ -0.14
PCDHB11-202ENST00000624887 FXYD2P54710 66 aa14.19□□□□□ -0.14
PCDHB11-202ENST00000624887 CEND1Q8N111 149 aa14.19□□□□□ -0.14
PCDHB11-202ENST00000624887 LINC00482Q8N8I6 264 aa14.19□□□□□ -0.14
PCDHB11-202ENST00000624887 RPL35AP18077 110 aaKnown RBP14.18□□□□□ -0.14
PCDHB11-202ENST00000624887 C1QTNF4Q9BXJ3 329 aa14.18□□□□□ -0.14
PCDHB11-202ENST00000624887 FN1P02751 2386 aaKnown RBP14.18□□□□□ -0.14
PCDHB11-202ENST00000624887 JMJD1CQ15652 2540 aa14.18□□□□□ -0.14
PCDHB11-202ENST00000624887 VCX2Q9H322 139 aa14.18□□□□□ -0.14
PCDHB11-202ENST00000624887 TMEM170BQ5T4T1 132 aa14.17□□□□□ -0.14
PCDHB11-202ENST00000624887 CHCHD7Q9BUK0 85 aa14.17□□□□□ -0.14
PCDHB11-202ENST00000624887 DAZ2Q13117 558 aaKnown RBP14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 Q6ZTI0 123 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 CSNK1G2-AS1Q8NCQ2 148 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 FLNBO75369 2602 aaKnown RBP14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 NSD1Q96L73 2696 aaPredicted RBP14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 ZNF815PA8K554 130 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 CRYBA4P53673 196 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 FAM104AQ969W3 186 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 C16orf74Q96GX8 76 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 ZNF479Q96JC4 524 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 SPCS1Q9Y6A9 102 aa14.16□□□□□ -0.14
PCDHB11-202ENST00000624887 TRAV4A0A0B4J268 109 aa14.15□□□□□ -0.14
PCDHB11-202ENST00000624887 AMELXQ99217 191 aa14.15□□□□□ -0.14
PCDHB11-202ENST00000624887 PLAC8L1A1L4L8 177 aa14.14□□□□□ -0.15
PCDHB11-202ENST00000624887 TRBV7-3A0A075B6L6 115 aa14.14□□□□□ -0.15
PCDHB11-202ENST00000624887 SMIM13P0DJ93 91 aa14.14□□□□□ -0.15
PCDHB11-202ENST00000624887 HIST1H4GQ99525 98 aa14.14□□□□□ -0.15
PCDHB11-202ENST00000624887 NOP10Q9NPE3 64 aaKnown RBP14.14□□□□□ -0.15
PCDHB11-202ENST00000624887 TMEM238C9JI98 176 aa14.13□□□□□ -0.15
PCDHB11-202ENST00000624887 FABP2P12104 132 aa14.13□□□□□ -0.15
PCDHB11-202ENST00000624887 PHLDA1Q8WV24 401 aaPredicted RBP14.13□□□□□ -0.15
PCDHB11-202ENST00000624887 SPANXA1Q9NS26 97 aa14.13□□□□□ -0.15
PCDHB11-202ENST00000624887 IGHV3-38A0A0C4DH36 116 aa14.13□□□□□ -0.15
PCDHB11-202ENST00000624887 UBE2D4Q9Y2X8 147 aa14.13□□□□□ -0.15
PCDHB11-202ENST00000624887 TRBV10-1A0A0K0K1A3 114 aa14.12□□□□□ -0.15
PCDHB11-202ENST00000624887 RAB37Q96AX2 223 aa14.12□□□□□ -0.15
PCDHB11-202ENST00000624887 A0A0J9YXV3 536 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 TMEM223A0PJW6 202 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 ZNF22P17026 224 aaPredicted RBP14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 CEMP1Q6PRD7 247 aaPredicted RBP14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 C2CD3Q4AC94 2353 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 K7EQD1 137 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 RRN3P1Q2M238 152 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 SAMD5Q5TGI4 173 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 SCGB1D4Q6XE38 83 aa14.11□□□□□ -0.15
PCDHB11-202ENST00000624887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.1□□□□□ -0.15
PCDHB11-202ENST00000624887 IGKV2-29A2NJV5 120 aaPredicted RBP14.1□□□□□ -0.15
PCDHB11-202ENST00000624887 TSPEAR-AS2P59090 65 aa14.1□□□□□ -0.15
PCDHB11-202ENST00000624887 PLEKHB2Q96CS7 222 aa14.1□□□□□ -0.15
PCDHB11-202ENST00000624887 OVOL2Q9BRP0 275 aa14.1□□□□□ -0.15
PCDHB11-202ENST00000624887 NHP2Q9NX24 153 aaKnown RBP14.1□□□□□ -0.15
PCDHB11-202ENST00000624887 CYSRT1A8MQ03 144 aa14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 INSL3P51460 131 aa14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 MRPS36P82909 103 aaKnown RBP14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 NOTCH3Q9UM47 2321 aa14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 J3QQQ9 107 aa14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 RPL36AP83881 106 aaKnown RBP14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 RPL36ALQ969Q0 106 aaKnown RBP14.09□□□□□ -0.15
PCDHB11-202ENST00000624887 SLC25A29Q8N8R3 303 aa14.08□□□□□ -0.16
PCDHB11-202ENST00000624887 K7ERJ3 54 aa14.07□□□□□ -0.16
PCDHB11-202ENST00000624887 LEPROTO15243 131 aa14.07□□□□□ -0.16
PCDHB11-202ENST00000624887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.07□□□□□ -0.16
PCDHB11-202ENST00000624887 NAA38Q9BRA0 125 aaKnown RBP14.07□□□□□ -0.16
PCDHB11-202ENST00000624887 CIDEAO60543 219 aa14.07□□□□□ -0.16
PCDHB11-202ENST00000624887 A0A0J9YY99 117 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE7O76087 117 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE12FP0CL80 117 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE12GP0CL81 117 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 GAGE12IP0CL82 117 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 SCGB1A1P11684 91 aa14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 LGALS3P17931 250 aaKnown RBP14.06□□□□□ -0.16
PCDHB11-202ENST00000624887 DAZ4Q86SG3 579 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms