RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
VCL-207ENST00000624354 ATP5J2P56134 94 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
VCL-207ENST00000624354 Q1RN00 199 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 MAPK1IP1LQ8NDC0 245 aa6.5□□□□□ -1.37
VCL-207ENST00000624354 UNC79Q9P2D8 2635 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 IGHV4-39P01824 125 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 LINC01587Q99440 93 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 LGALS9O00182 355 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 IGHV3-33P01772 117 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 P0DMU3 169 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 FAM231AP0DMU4 169 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 FAM231CP0DMU5 169 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 ZNF56Q15929 161 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 C5orf47Q569G3 176 aa6.49□□□□□ -1.37
VCL-207ENST00000624354 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
VCL-207ENST00000624354 TRAV12-3A0A0B4J271 114 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 A4D1N5 150 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 ZNF469Q96JG9 3925 aaPredicted RBP6.48□□□□□ -1.37
VCL-207ENST00000624354 TRBV27A0A0K0K1C4 114 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 TRBV10-2A0A0K0K1G8 114 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 H3BUX3 64 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
VCL-207ENST00000624354 DNAJC30Q96LL9 226 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 TRBV6-5A0A0K0K1A5 114 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 ZNF876PQ49A33 203 aa6.48□□□□□ -1.37
VCL-207ENST00000624354 ZNF256Q9Y2P7 627 aaPredicted RBP6.48□□□□□ -1.37
VCL-207ENST00000624354 UBR5O95071 2799 aaPredicted RBP6.47□□□□□ -1.37
VCL-207ENST00000624354 J3QQQ9 107 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 TSPEAR-AS2P59090 65 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 BLCAPP62952 87 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 ZNRF2Q8NHG8 242 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 BEX4Q9NWD9 120 aaPredicted RBP6.47□□□□□ -1.37
VCL-207ENST00000624354 LINC00694P0DN24 101 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 ZNF843Q8N446 348 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 TMEM263Q8WUH6 116 aaKnown RBP6.47□□□□□ -1.37
VCL-207ENST00000624354 A6NDX4 124 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 K7EMT4 169 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 IGHV4-38-2P0DP08 117 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
VCL-207ENST00000624354 FN1P02751 2386 aaKnown RBP6.46□□□□□ -1.38
VCL-207ENST00000624354 A0A0B4J2C4 111 aa6.46□□□□□ -1.38
VCL-207ENST00000624354 IGLV1-40P01703 118 aa6.46□□□□□ -1.38
VCL-207ENST00000624354 C9orf153Q5TBE3 101 aa6.46□□□□□ -1.38
VCL-207ENST00000624354 LINC01600Q96MT4 127 aa6.46□□□□□ -1.38
VCL-207ENST00000624354 PIMREGQ9BSJ6 248 aa6.46□□□□□ -1.38
VCL-207ENST00000624354 IGHV4-61A0A0C4DH41 118 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 ELANEP08246 267 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 RHOHQ15669 191 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 MXRA5Q9NR99 2828 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 MUC4Q99102 2169 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.386e-6■■■□□ 16.7
VCL-207ENST00000624354 IGHV3-16A0A0C4DH30 117 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 EDN2P20800 178 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 C9orf85Q96MD7 179 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 SPXQ9BT56 116 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.45□□□□□ -1.38
VCL-207ENST00000624354 TRBV7-7A0A0K0K1E9 115 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 M0QY20 66 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 IGKV3-20P01619 116 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 AMELXQ99217 191 aa6.45□□□□□ -1.38
VCL-207ENST00000624354 KMT2BQ9UMN6 2715 aaPredicted RBP6.44□□□□□ -1.38
VCL-207ENST00000624354 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 LEPROTO15243 131 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
VCL-207ENST00000624354 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 HIVEP2P31629 2446 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 TRAV12-2A0A075B6T6 113 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 LOC107984640A0A0U1RRK4 108 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 M0R2P5 195 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 SNRPD3P62318 126 aaKnown RBP6.44□□□□□ -1.38
VCL-207ENST00000624354 DUX3Q96PT4 197 aa6.44□□□□□ -1.38
VCL-207ENST00000624354 OPRPNQ99935 248 aaPredicted RBP6.44□□□□□ -1.38
VCL-207ENST00000624354 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 NDUFA7O95182 113 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 TRGV11A0A075B6L2 103 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 IGHV1OR15-1A0A075B7D0 117 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 A0A0J9YX75 114 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 C3orf22Q8N5N4 141 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 C20orf203Q8NBC4 194 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 H3BT86 120 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 KRTAP10-9P60411 292 aa6.43□□□□□ -1.38
VCL-207ENST00000624354 BAHCC1Q9P281 2608 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 H7C423 109 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 I3L3M4 83 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 J3KT08 172 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 TRIAP1O43715 76 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 ZNF22P17026 224 aaPredicted RBP6.42□□□□□ -1.38
VCL-207ENST00000624354 HERVK_113P63121 156 aa6.42□□□□□ -1.38
VCL-207ENST00000624354 CFHR3Q02985 330 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms