RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ZFP36P26651 326 aaKnown RBP11.25□□□□□ -0.61
PMS1-221ENST00000624204 HERVK_113P63121 156 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 DEFB123Q8N688 67 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 M0QY20 66 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 NXPH4O95158 308 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 USP9XQ93008 2570 aaPredicted RBP11.25□□□□□ -0.61
PMS1-221ENST00000624204 A0A0J9YX75 114 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 NPFFO15130 113 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 SAA4P35542 130 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 RHOHQ15669 191 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
PMS1-221ENST00000624204 MIAQ16674 131 aa11.24□□□□□ -0.61
PMS1-221ENST00000624204 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
PMS1-221ENST00000624204 TMEM61Q8N0U2 210 aa11.24□□□□□ -0.61
PMS1-221ENST00000624204 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
PMS1-221ENST00000624204 CSDC2Q9Y534 153 aaKnown RBP11.24□□□□□ -0.61
PMS1-221ENST00000624204 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 SPINK13Q1W4C9 94 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 CCL21O00585 134 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 SOCS3O14543 225 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 NRGNQ92686 78 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
PMS1-221ENST00000624204 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 Q9UF83 564 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 VPS13CQ709C8 3753 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
PMS1-221ENST00000624204 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
PMS1-221ENST00000624204 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 IGHV1-58A0A0C4DH39 117 aa11.22□□□□□ -0.61
PMS1-221ENST00000624204 ZNF292O60281 2723 aa11.21□□□□□ -0.61
PMS1-221ENST00000624204 UQCRQO14949 82 aa11.21□□□□□ -0.62
PMS1-221ENST00000624204 FAM19A4Q96LR4 140 aa11.21□□□□□ -0.62
PMS1-221ENST00000624204 IGKV3OR2-268A0A0C4DH90 116 aa11.21□□□□□ -0.62
PMS1-221ENST00000624204 BSNQ9UPA5 3926 aa11.2□□□□□ -0.62
PMS1-221ENST00000624204 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
PMS1-221ENST00000624204 SPANXDQ9BXN6 97 aa11.2□□□□□ -0.62
PMS1-221ENST00000624204 SPANXCQ9NY87 97 aa11.2□□□□□ -0.62
PMS1-221ENST00000624204 DEFB121Q5J5C9 76 aa11.2□□□□□ -0.62
PMS1-221ENST00000624204 Q9HAA7 133 aa11.2□□□□□ -0.62
PMS1-221ENST00000624204 LINC00643Q86TS7 51 aa11.19□□□□□ -0.62
PMS1-221ENST00000624204 KLLNB2CW77 178 aa11.19□□□□□ -0.62
PMS1-221ENST00000624204 IMUPQ9GZP8 106 aa11.19□□□□□ -0.62
PMS1-221ENST00000624204 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
PMS1-221ENST00000624204 ACYP1P07311 99 aa11.19□□□□□ -0.62
PMS1-221ENST00000624204 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
PMS1-221ENST00000624204 DAZ4Q86SG3 579 aaKnown RBP11.19□□□□□ -0.62
PMS1-221ENST00000624204 DAZ1Q9NQZ3 744 aaKnown RBP11.19□□□□□ -0.62
PMS1-221ENST00000624204 DAZ3Q9NR90 486 aaKnown RBP11.19□□□□□ -0.62
PMS1-221ENST00000624204 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
PMS1-221ENST00000624204 NDUFA4O00483 81 aa11.18□□□□□ -0.62
PMS1-221ENST00000624204 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
PMS1-221ENST00000624204 IGKV3D-7A0A0C4DH55 119 aa11.18□□□□□ -0.62
PMS1-221ENST00000624204 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
PMS1-221ENST00000624204 DGAT2L7PQ6IED9 249 aa11.17□□□□□ -0.62
PMS1-221ENST00000624204 J3KT08 172 aa11.17□□□□□ -0.62
PMS1-221ENST00000624204 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
PMS1-221ENST00000624204 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
PMS1-221ENST00000624204 CDSNQ15517 529 aa11.16□□□□□ -0.62
PMS1-221ENST00000624204 LINC00526Q96FQ7 95 aa11.16□□□□□ -0.62
PMS1-221ENST00000624204 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
PMS1-221ENST00000624204 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
PMS1-221ENST00000624204 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
PMS1-221ENST00000624204 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
PMS1-221ENST00000624204 HIVEP3Q5T1R4 2406 aa11.15□□□□□ -0.62
PMS1-221ENST00000624204 BAALC-AS2P0C853 105 aa11.15□□□□□ -0.62
PMS1-221ENST00000624204 C5orf47Q569G3 176 aa11.15□□□□□ -0.62
PMS1-221ENST00000624204 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
PMS1-221ENST00000624204 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.62
PMS1-221ENST00000624204 SPTBN4Q9H254 2564 aa11.15□□□□□ -0.62
PMS1-221ENST00000624204 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.63
PMS1-221ENST00000624204 DCANP1Q8TF63 244 aa11.15□□□□□ -0.63
PMS1-221ENST00000624204 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
PMS1-221ENST00000624204 CIRBPQ14011 172 aaKnown RBP11.14□□□□□ -0.63
PMS1-221ENST00000624204 SDIM1Q6ZPB5 146 aa11.14□□□□□ -0.63
PMS1-221ENST00000624204 ITPR1Q14643 2758 aa11.14□□□□□ -0.63
PMS1-221ENST00000624204 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
PMS1-221ENST00000624204 Q8NA96 180 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 COX7A2LO14548 114 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 BLCAPP62952 87 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 COX7CP15954 63 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 LY6DQ14210 128 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 Q8N2B8 174 aa11.13□□□□□ -0.63
PMS1-221ENST00000624204 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
PMS1-221ENST00000624204 IGHV1OR15-1A0A075B7D0 117 aa11.12□□□□□ -0.63
PMS1-221ENST00000624204 TIRAPP58753 221 aa11.12□□□□□ -0.63
PMS1-221ENST00000624204 CACNA1AO00555 2505 aa11.12□□□□□ -0.63
PMS1-221ENST00000624204 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
PMS1-221ENST00000624204 Q9H8V8 135 aa11.12□□□□□ -0.63
PMS1-221ENST00000624204 ZANQ9Y493 2812 aa11.11□□□□□ -0.63
PMS1-221ENST00000624204 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
PMS1-221ENST00000624204 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
PMS1-221ENST00000624204 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
PMS1-221ENST00000624204 A0A087WVE0 104 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms