RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
GGA3-223ENST00000621870 TDRG1Q3Y452 100 aa6.96□□□□□ -1.29
GGA3-223ENST00000621870 Q8N6K4 173 aa6.96□□□□□ -1.29
GGA3-223ENST00000621870 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.29
GGA3-223ENST00000621870 Q9H8V8 135 aa6.96□□□□□ -1.29
GGA3-223ENST00000621870 BOD1L1Q8NFC6 3051 aa6.96□□□□□ -1.29
GGA3-223ENST00000621870 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 ZFP2Q6ZN57 461 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 ZNF747Q9BV97 191 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 SPANXA1Q9NS26 97 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 TP53TG3Q9ULZ0 132 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 AKAP13Q12802 2813 aa6.96□□□□□ -1.3
GGA3-223ENST00000621870 COL5A1P20908 1838 aaPredicted RBP6.95□□□□□ -1.3
GGA3-223ENST00000621870 C10orf126Q8N4M7 172 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 DEFB131BA0A096LNP1 70 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 COX7A2LO14548 114 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 FRMD6-AS1P0C7T7 363 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 EML5Q05BV3 1969 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 MBD6Q96DN6 1003 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 SCRT2Q9NQ03 307 aa6.95□□□□□ -1.3
GGA3-223ENST00000621870 TET2Q6N021 2002 aaPredicted RBP6.94□□□□□ -1.3
GGA3-223ENST00000621870 GDF5OSQ5U4N7 250 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 DMXL1Q9Y485 3027 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 P0DMU3 169 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 FAM231AP0DMU4 169 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 FAM231CP0DMU5 169 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 RPL18AQ02543 176 aaKnown RBP6.94□□□□□ -1.3
GGA3-223ENST00000621870 LINC00322Q6ZN03 302 aaPredicted RBP6.94□□□□□ -1.3
GGA3-223ENST00000621870 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 COX11Q9Y6N1 276 aa6.94□□□□□ -1.3
GGA3-223ENST00000621870 SLC25A29Q8N8R3 303 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 TRAV4A0A0B4J268 109 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 K7EMI3 77 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 CDK2AP2O75956 126 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 C9JAW5 83 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 CTRLP40313 264 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 EXPH5Q8NEV8 1989 aa6.93□□□□□ -1.3
GGA3-223ENST00000621870 TAL2Q16559 108 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 LINC00173Q6ZV60 143 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 DMXL2Q8TDJ6 3036 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 AGRNO00468 2067 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 TRBV10-1A0A0K0K1A3 114 aa6.92□□□□□ -1.3
GGA3-223ENST00000621870 CEMP1Q6PRD7 247 aaPredicted RBP6.92□□□□□ -1.3
GGA3-223ENST00000621870 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 CCL25O15444 150 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 IGLV1-40P01703 118 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 Q6ZVH6 145 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 MTURNQ8N3F0 131 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 ATG2AQ2TAZ0 1938 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 PRM2P04554 102 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 MED14OSP0DP75 135 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 RNF183Q96D59 192 aa6.91□□□□□ -1.3
GGA3-223ENST00000621870 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.3
GGA3-223ENST00000621870 SMIM9A6NGZ8 99 aa6.9□□□□□ -1.3
GGA3-223ENST00000621870 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
GGA3-223ENST00000621870 PCP2Q8IVA1 136 aa6.9□□□□□ -1.3
GGA3-223ENST00000621870 ZFAND2AQ8N6M9 145 aa6.9□□□□□ -1.3
GGA3-223ENST00000621870 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
GGA3-223ENST00000621870 OPRPNQ99935 248 aaPredicted RBP6.9□□□□□ -1.3
GGA3-223ENST00000621870 RAI1Q7Z5J4 1906 aaPredicted RBP6.9□□□□□ -1.31
GGA3-223ENST00000621870 CHD6Q8TD26 2715 aa6.9□□□□□ -1.31
GGA3-223ENST00000621870 COX8AP10176 69 aa6.9□□□□□ -1.31
GGA3-223ENST00000621870 GTSF1LQ9H1H1 148 aa6.89□□□□□ -1.31
GGA3-223ENST00000621870 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
GGA3-223ENST00000621870 MIFP14174 115 aa6.89□□□□□ -1.31
GGA3-223ENST00000621870 C20orf203Q8NBC4 194 aa6.89□□□□□ -1.31
GGA3-223ENST00000621870 TTTY13Q9BZ97 58 aa6.89□□□□□ -1.31
GGA3-223ENST00000621870 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 NDUFA1O15239 70 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 OVOL2Q9BRP0 275 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 IGLV2-8P01709 118 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 HIST1H4AP62805 103 aaKnown RBP6.88□□□□□ -1.31
GGA3-223ENST00000621870 DAND5Q8N907 189 aa6.88□□□□□ -1.31
GGA3-223ENST00000621870 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 ETDCA0A1B0GVM5 59 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 Q8N976 141 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 ODF3Q96PU9 254 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 IGLV2-18A0A075B6J9 118 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 IGHV4-28A0A0C4DH34 117 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 IGHV4-30-4P0DP06 118 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 TIRAPP58753 221 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 ZFAND6Q6FIF0 208 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 DEFB105AQ8NG35 78 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 TRAV13-2A0A0B4J235 113 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 EDN2P20800 178 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
GGA3-223ENST00000621870 SIGMAR1Q99720 223 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms