RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
TARDBP-225ENST00000621715 CCL20P78556 96 aa10.42□□□□□ -0.74
TARDBP-225ENST00000621715 WDR73Q6P4I2 378 aa10.42□□□□□ -0.74
TARDBP-225ENST00000621715 STPG4Q8N801 248 aa10.42□□□□□ -0.74
TARDBP-225ENST00000621715 H7C1H1 209 aa10.41□□□□□ -0.74
TARDBP-225ENST00000621715 NDUFS6O75380 124 aaKnown RBP10.41□□□□□ -0.74
TARDBP-225ENST00000621715 SULT1A2P50226 295 aa10.41□□□□□ -0.74
TARDBP-225ENST00000621715 CENPWQ5EE01 88 aa10.41□□□□□ -0.74
TARDBP-225ENST00000621715 OR2D3Q8NGH3 330 aa10.41□□□□□ -0.74
TARDBP-225ENST00000621715 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
TARDBP-225ENST00000621715 PFDN1O60925 122 aa10.4□□□□□ -0.74
TARDBP-225ENST00000621715 AMTP48728 403 aa10.4□□□□□ -0.74
TARDBP-225ENST00000621715 KCNRGQ8N5I3 272 aa10.4□□□□□ -0.74
TARDBP-225ENST00000621715 C11orf52Q96A22 123 aa10.4□□□□□ -0.74
TARDBP-225ENST00000621715 NIT2Q9NQR4 276 aa10.4□□□□□ -0.74
TARDBP-225ENST00000621715 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
TARDBP-225ENST00000621715 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
TARDBP-225ENST00000621715 LYZL1Q6UWQ5 148 aa10.39□□□□□ -0.75
TARDBP-225ENST00000621715 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
TARDBP-225ENST00000621715 LINC00526Q96FQ7 95 aa10.39□□□□□ -0.75
TARDBP-225ENST00000621715 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-225ENST00000621715 UBE2L6O14933 153 aa10.38□□□□□ -0.75
TARDBP-225ENST00000621715 FOXI1Q12951 378 aa10.38□□□□□ -0.75
TARDBP-225ENST00000621715 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
TARDBP-225ENST00000621715 Q6ZNX1 250 aa10.38□□□□□ -0.75
TARDBP-225ENST00000621715 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
TARDBP-225ENST00000621715 NTF3P20783 257 aa10.37□□□□□ -0.75
TARDBP-225ENST00000621715 CACNG7P62955 275 aa10.37□□□□□ -0.75
TARDBP-225ENST00000621715 COTL1Q14019 142 aa10.37□□□□□ -0.75
TARDBP-225ENST00000621715 GATD1Q8NB37 220 aa10.37□□□□□ -0.75
TARDBP-225ENST00000621715 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-225ENST00000621715 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-225ENST00000621715 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
TARDBP-225ENST00000621715 GAS8-AS1O95177 125 aa10.36□□□□□ -0.75
TARDBP-225ENST00000621715 H2AFB1P0C5Y9 115 aa10.36□□□□□ -0.75
TARDBP-225ENST00000621715 CFAP161Q6P656 301 aa10.36□□□□□ -0.75
TARDBP-225ENST00000621715 RPL39LQ96EH5 51 aaKnown RBP10.36□□□□□ -0.75
TARDBP-225ENST00000621715 GNG13Q9P2W3 67 aa10.36□□□□□ -0.75
TARDBP-225ENST00000621715 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
TARDBP-225ENST00000621715 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
TARDBP-225ENST00000621715 CTRLP40313 264 aa10.34□□□□□ -0.75
TARDBP-225ENST00000621715 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-225ENST00000621715 ZNF345Q14585 488 aa10.34□□□□□ -0.75
TARDBP-225ENST00000621715 F2Z2F3 143 aa10.33□□□□□ -0.76
TARDBP-225ENST00000621715 TRGC1P0CF51 173 aa10.33□□□□□ -0.76
TARDBP-225ENST00000621715 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
TARDBP-225ENST00000621715 IFNA1P01562 189 aa10.32□□□□□ -0.76
TARDBP-225ENST00000621715 FGF6P10767 208 aa10.31□□□□□ -0.76
TARDBP-225ENST00000621715 XCL1P47992 114 aa10.31□□□□□ -0.76
TARDBP-225ENST00000621715 RNASEKQ6P5S7 137 aaKnown RBP10.31□□□□□ -0.76
TARDBP-225ENST00000621715 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
TARDBP-225ENST00000621715 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 BCL2L11O43521 198 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 GNG4P50150 75 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 TWIST1Q15672 202 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 AMMECR1LQ6DCA0 310 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 REG3GQ6UW15 175 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 NUDT10Q8NFP7 164 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 NUDT11Q96G61 164 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 MANBALQ9NQG1 85 aa10.3□□□□□ -0.76
TARDBP-225ENST00000621715 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 CCL25O15444 150 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 Q6ZRP5 223 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 CARD19Q96LW7 228 aa10.28□□□□□ -0.76
TARDBP-225ENST00000621715 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
TARDBP-225ENST00000621715 MUC2Q02817 5179 aa10.27□□□□□ -0.76
TARDBP-225ENST00000621715 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
TARDBP-225ENST00000621715 K7EN84 100 aa10.27□□□□□ -0.77
TARDBP-225ENST00000621715 APCSP02743 223 aa10.27□□□□□ -0.77
TARDBP-225ENST00000621715 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
TARDBP-225ENST00000621715 KANTRA0A1W2PQU2 76 aa10.26□□□□□ -0.77
TARDBP-225ENST00000621715 XKRY2A2RUG3 117 aa10.26□□□□□ -0.77
TARDBP-225ENST00000621715 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
TARDBP-225ENST00000621715 NCR2O95944 276 aa10.26□□□□□ -0.77
TARDBP-225ENST00000621715 IGHV1-58A0A0C4DH39 117 aa10.25□□□□□ -0.77
TARDBP-225ENST00000621715 H7C423 109 aa10.25□□□□□ -0.77
TARDBP-225ENST00000621715 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
TARDBP-225ENST00000621715 MEF2BQ02080 365 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-225ENST00000621715 MED9Q9NWA0 146 aa10.25□□□□□ -0.77
TARDBP-225ENST00000621715 LINC00474Q9P2X8 69 aa10.25□□□□□ -0.77
TARDBP-225ENST00000621715 TSHBP01222 138 aa10.24□□□□□ -0.77
TARDBP-225ENST00000621715 ESDP10768 282 aa10.24□□□□□ -0.77
TARDBP-225ENST00000621715 SYCNQ0VAF6 134 aa10.24□□□□□ -0.77
TARDBP-225ENST00000621715 RPP21Q9H633 154 aaKnown RBP10.24□□□□□ -0.77
TARDBP-225ENST00000621715 BCL2P10415 239 aa10.23□□□□□ -0.77
TARDBP-225ENST00000621715 GAGE2BQ13066 116 aa10.23□□□□□ -0.77
TARDBP-225ENST00000621715 PSORS1C2Q9UIG4 136 aa10.23□□□□□ -0.77
TARDBP-225ENST00000621715 PDE6DO43924 150 aa10.22□□□□□ -0.77
TARDBP-225ENST00000621715 ZNF25P17030 456 aaPredicted RBP10.22□□□□□ -0.77
TARDBP-225ENST00000621715 OCC1Q8TAD7 63 aa10.22□□□□□ -0.77
TARDBP-225ENST00000621715 CDC42SE2Q9NRR3 84 aa10.22□□□□□ -0.77
TARDBP-225ENST00000621715 TMEM242Q9NWH2 141 aa10.22□□□□□ -0.77
TARDBP-225ENST00000621715 IGLV4-69A0A075B6H9 119 aa10.21□□□□□ -0.77
TARDBP-225ENST00000621715 I3L3M4 83 aa10.21□□□□□ -0.77
TARDBP-225ENST00000621715 RGS21Q2M5E4 152 aa10.21□□□□□ -0.77
TARDBP-225ENST00000621715 BATF3Q9NR55 127 aa10.21□□□□□ -0.77
TARDBP-225ENST00000621715 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms