RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.28□□□□□ -1.24
VTA1-205ENST00000620996 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
VTA1-205ENST00000620996 F8P00451 2351 aa7.27□□□□□ -1.25
VTA1-205ENST00000620996 NXPH4O95158 308 aa7.27□□□□□ -1.25
VTA1-205ENST00000620996 TM2D2Q9BX73 214 aa7.27□□□□□ -1.25
VTA1-205ENST00000620996 IGLV1-51P01701 117 aa7.26□□□□□ -1.25
VTA1-205ENST00000620996 ZFAND6Q6FIF0 208 aa7.26□□□□□ -1.25
VTA1-205ENST00000620996 CDIP1Q9H305 208 aa7.26□□□□□ -1.25
VTA1-205ENST00000620996 IGLV2-18A0A075B6J9 118 aa7.26□□□□□ -1.25
VTA1-205ENST00000620996 KIF25-AS1Q9Y6Z4 181 aa7.26□□□□□ -1.25
VTA1-205ENST00000620996 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 GAGE7O76087 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 PPP1R17O96001 155 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 GAGE4Q13068 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 LINC01545Q5VT33 79 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 SCGB3A1Q96QR1 104 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 DKK2Q9UBU2 259 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 ORMDL2Q53FV1 153 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 TRPT1Q86TN4 253 aaKnown RBP7.25□□□□□ -1.25
VTA1-205ENST00000620996 ATRQ13535 2644 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 M0R2P5 195 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 CRYGDP07320 174 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 LINC00315P59091 139 aa7.25□□□□□ -1.25
VTA1-205ENST00000620996 F8W1H4 67 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 P0DMU3 169 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 FAM231AP0DMU4 169 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 FAM231CP0DMU5 169 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 ATP5LO75964 103 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 IGHV3-53P01767 116 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 SRSF9Q13242 221 aaKnown RBP eCLIP7.24□□□□□ -1.25
VTA1-205ENST00000620996 LINC00482Q8N8I6 264 aa7.24□□□□□ -1.25
VTA1-205ENST00000620996 A8MTW9 85 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 CMC4P56277 68 aaPredicted RBP7.23□□□□□ -1.25
VTA1-205ENST00000620996 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 SPATA3Q8NHX4 192 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 EMP1P54849 157 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 FOXI1Q12951 378 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 TTC32Q5I0X7 151 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 GTSCR1Q86UQ5 136 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 C1orf158Q8N1D5 194 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 LOC107984640A0A0U1RRK4 108 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 VCYO14598 125 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 NHLRC4P0CG21 123 aaPredicted RBP7.23□□□□□ -1.25
VTA1-205ENST00000620996 FGF6P10767 208 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 LGALS9BQ3B8N2 356 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 LGALS9CQ6DKI2 356 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 SPXQ9BT56 116 aa7.23□□□□□ -1.25
VTA1-205ENST00000620996 MEIG1Q5JSS6 88 aa7.22□□□□□ -1.25
VTA1-205ENST00000620996 VCX2Q9H322 139 aa7.22□□□□□ -1.25
VTA1-205ENST00000620996 TP53TG1Q9Y2A0 90 aa7.22□□□□□ -1.25
VTA1-205ENST00000620996 M0QY20 66 aa7.22□□□□□ -1.25
VTA1-205ENST00000620996 NFE4Q86UQ8 179 aa7.22□□□□□ -1.25
VTA1-205ENST00000620996 TENM1Q9UKZ4 2725 aa7.22□□□□□ -1.25
VTA1-205ENST00000620996 A8MWV9 139 aa7.21□□□□□ -1.25
VTA1-205ENST00000620996 TEP1Q99973 2627 aaKnown RBP7.21□□□□□ -1.25
VTA1-205ENST00000620996 H7C1H1 209 aa7.21□□□□□ -1.26
VTA1-205ENST00000620996 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
VTA1-205ENST00000620996 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
VTA1-205ENST00000620996 BEAN1Q3B7T3 259 aa7.21□□□□□ -1.26
VTA1-205ENST00000620996 C11orf72Q8NBR9 251 aa7.21□□□□□ -1.26
VTA1-205ENST00000620996 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
VTA1-205ENST00000620996 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 ZFP2Q6ZN57 461 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 MRPL35Q9NZE8 188 aaKnown RBP7.2□□□□□ -1.26
VTA1-205ENST00000620996 VWFP04275 2813 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 IGKCP01834 107 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 MORN3Q6PF18 240 aaPredicted RBP7.2□□□□□ -1.26
VTA1-205ENST00000620996 POM121L12Q8N7R1 296 aa7.2□□□□□ -1.26
VTA1-205ENST00000620996 PHLDA1Q8WV24 401 aaPredicted RBP7.2□□□□□ -1.26
VTA1-205ENST00000620996 CSDC2Q9Y534 153 aaKnown RBP7.2□□□□□ -1.26
VTA1-205ENST00000620996 A0A087WX48 190 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 IGHV3-38A0A0C4DH36 116 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 IGLL5B9A064 214 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 DPM2O94777 84 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 GAGE2BQ13066 116 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 C9orf66Q5T8R8 295 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 NACAE9PAV3 2078 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 PSMB2P49721 201 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 POLR2KP53803 58 aaKnown RBP7.19□□□□□ -1.26
VTA1-205ENST00000620996 NDUFV3P56181 108 aaKnown RBP7.19□□□□□ -1.26
VTA1-205ENST00000620996 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 Q6ZTI0 123 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 TRGV2A0A075B6R0 118 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 RRN3P1Q2M238 152 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 Q6ZSN1 163 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 Q9UF83 564 aa7.19□□□□□ -1.26
VTA1-205ENST00000620996 I3L3M4 83 aa7.18□□□□□ -1.26
VTA1-205ENST00000620996 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
VTA1-205ENST00000620996 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms