RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 FAM215AQ9Y5M1 114 aa10.96□□□□□ -0.65
PTPN9-206ENST00000618819 PLXND1Q9Y4D7 1925 aa10.96□□□□□ -0.66
PTPN9-206ENST00000618819 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.66
PTPN9-206ENST00000618819 WFDC10AQ9H1F0 79 aa10.96□□□□□ -0.66
PTPN9-206ENST00000618819 SPRY4Q9C004 299 aa10.95□□□□□ -0.66
PTPN9-206ENST00000618819 TRBV6-5A0A0K0K1A5 114 aa10.95□□□□□ -0.66
PTPN9-206ENST00000618819 CACNA1GO43497 2377 aa10.95□□□□□ -0.66
PTPN9-206ENST00000618819 Q6ZTI0 123 aa10.95□□□□□ -0.66
PTPN9-206ENST00000618819 K7ENP7 123 aa10.95□□□□□ -0.66
PTPN9-206ENST00000618819 IMUPQ9GZP8 106 aa10.95□□□□□ -0.66
PTPN9-206ENST00000618819 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.94□□□□□ -0.665e-7■■■■■ 43.6
PTPN9-206ENST00000618819 RLFQ13129 1914 aa10.94□□□□□ -0.66
PTPN9-206ENST00000618819 DNAJC9-AS1A6NH13 148 aa10.94□□□□□ -0.66
PTPN9-206ENST00000618819 IGLV4-3A0A075B6K6 122 aa10.93□□□□□ -0.66
PTPN9-206ENST00000618819 SHANK1Q9Y566 2161 aa10.93□□□□□ -0.66
PTPN9-206ENST00000618819 SPTAN1Q13813 2472 aaKnown RBP10.93□□□□□ -0.66
PTPN9-206ENST00000618819 A0A0J9YX75 114 aa10.93□□□□□ -0.66
PTPN9-206ENST00000618819 Q6ZQY7 126 aa10.93□□□□□ -0.66
PTPN9-206ENST00000618819 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.92□□□□□ -0.66
PTPN9-206ENST00000618819 CFAP126Q5VTH2 177 aa10.92□□□□□ -0.66
PTPN9-206ENST00000618819 GVINP1Q7Z2Y8 2422 aa10.92□□□□□ -0.66
PTPN9-206ENST00000618819 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
PTPN9-206ENST00000618819 KIR2DL5BQ8NHK3 375 aa10.91□□□□□ -0.66
PTPN9-206ENST00000618819 TNS1Q9HBL0 1735 aaKnown RBP10.91□□□□□ -0.66
PTPN9-206ENST00000618819 CRYGDP07320 174 aa10.91□□□□□ -0.66
PTPN9-206ENST00000618819 MAP6D1Q9H9H5 199 aa10.91□□□□□ -0.66
PTPN9-206ENST00000618819 IGLV2-14P01704 120 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 Q8N976 141 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 IBA57-AS1B1ANH7 110 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 H7C423 109 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 TNCP24821 2201 aa10.9□□□□□ -0.66
PTPN9-206ENST00000618819 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.67
PTPN9-206ENST00000618819 K7EMT4 169 aa10.89□□□□□ -0.67
PTPN9-206ENST00000618819 OBSL1O75147 1896 aa10.89□□□□□ -0.67
PTPN9-206ENST00000618819 IGLV9-49A0A0B4J1Y8 123 aa10.89□□□□□ -0.67
PTPN9-206ENST00000618819 Q6ZVQ6 151 aa10.89□□□□□ -0.67
PTPN9-206ENST00000618819 C4orf3Q8WVX3 66 aa10.89□□□□□ -0.67
PTPN9-206ENST00000618819 A0A087WVE0 104 aa10.88□□□□□ -0.67
PTPN9-206ENST00000618819 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
PTPN9-206ENST00000618819 NRGNQ92686 78 aa10.88□□□□□ -0.67
PTPN9-206ENST00000618819 IGF1P05019 195 aa10.88□□□□□ -0.67
PTPN9-206ENST00000618819 PROK1P58294 105 aa10.88□□□□□ -0.67
PTPN9-206ENST00000618819 TCF20Q9UGU0 1960 aaKnown RBP10.88□□□□□ -0.67
PTPN9-206ENST00000618819 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
PTPN9-206ENST00000618819 LOC107984640A0A0U1RRK4 108 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 ODF3L1Q8IXM7 274 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 C14orf177Q52M58 125 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 X6R8D5 127 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 LST1O00453 97 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 C2orf91Q6ZV80 131 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
PTPN9-206ENST00000618819 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
PTPN9-206ENST00000618819 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
PTPN9-206ENST00000618819 C11orf45Q8TAV5 145 aa10.86□□□□□ -0.67
PTPN9-206ENST00000618819 LINC00208Q96KT6 92 aa10.86□□□□□ -0.67
PTPN9-206ENST00000618819 IGFL3Q6UXB1 125 aa10.86□□□□□ -0.67
PTPN9-206ENST00000618819 SERTAD4-AS1Q5TG53 156 aa10.86□□□□□ -0.67
PTPN9-206ENST00000618819 SMAD5-AS1Q9Y6J3 95 aa10.85□□□□□ -0.67
PTPN9-206ENST00000618819 LY6LH3BQJ8 138 aa10.85□□□□□ -0.67
PTPN9-206ENST00000618819 Q6JHZ5 121 aa10.85□□□□□ -0.67
PTPN9-206ENST00000618819 GREB1LQ9C091 1923 aaPredicted RBP10.85□□□□□ -0.67
PTPN9-206ENST00000618819 UBE2D4Q9Y2X8 147 aa10.85□□□□□ -0.67
PTPN9-206ENST00000618819 Q6ZS46 218 aa10.85□□□□□ -0.67
PTPN9-206ENST00000618819 PLA2G2AP14555 144 aa10.84□□□□□ -0.67
PTPN9-206ENST00000618819 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
PTPN9-206ENST00000618819 COL4A6Q14031 1691 aa10.84□□□□□ -0.67
PTPN9-206ENST00000618819 ZFP36P26651 326 aaKnown RBP10.84□□□□□ -0.67
PTPN9-206ENST00000618819 MED13Q9UHV7 2174 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 PRYO14603 147 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 DEFB113Q30KQ7 82 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 Q8N7P7 452 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 SPINK1P00995 79 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 ESRGQ1W209 222 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.83□□□□□ -0.68
PTPN9-206ENST00000618819 MBD6Q96DN6 1003 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
PTPN9-206ENST00000618819 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
PTPN9-206ENST00000618819 LY6G6EA0A0G2JKS1 128 aa10.82□□□□□ -0.68
PTPN9-206ENST00000618819 U3KQA8 63 aa10.82□□□□□ -0.68
PTPN9-206ENST00000618819 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
PTPN9-206ENST00000618819 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
PTPN9-206ENST00000618819 RNF185Q96GF1 192 aa10.81□□□□□ -0.68
PTPN9-206ENST00000618819 UBE2D1P51668 147 aa10.81□□□□□ -0.68
PTPN9-206ENST00000618819 J3QKU1 62 aa10.81□□□□□ -0.68
PTPN9-206ENST00000618819 UBE2D3P61077 147 aa10.81□□□□□ -0.68
PTPN9-206ENST00000618819 MALRD1Q5VYJ5 2156 aa10.8□□□□□ -0.68
PTPN9-206ENST00000618819 MYCNOSP40205 109 aa10.8□□□□□ -0.68
PTPN9-206ENST00000618819 SYCNQ0VAF6 134 aa10.8□□□□□ -0.68
PTPN9-206ENST00000618819 C11orf1Q9H5F2 150 aa10.8□□□□□ -0.68
PTPN9-206ENST00000618819 TRBV6-8A0A0A6YYG3 113 aa10.8□□□□□ -0.68
PTPN9-206ENST00000618819 M0QY20 66 aa10.79□□□□□ -0.68
PTPN9-206ENST00000618819 CRYGAP11844 174 aa10.79□□□□□ -0.68
PTPN9-206ENST00000618819 DHRS4-AS1Q9P1J3 65 aa10.79□□□□□ -0.68
PTPN9-206ENST00000618819 KRTAP27-1Q3LI81 207 aa10.79□□□□□ -0.68
PTPN9-206ENST00000618819 LINC01548A6NM66 108 aa10.79□□□□□ -0.68
PTPN9-206ENST00000618819 CRIP1P50238 77 aa10.79□□□□□ -0.68
PTPN9-206ENST00000618819 SBF1O95248 1867 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms