RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 NEXN-AS1Q8NBZ9 246 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 SPRY2O43597 315 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 WT1P19544 449 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-208ENST00000618395 PINLYPA6NC86 204 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 IGHV3-30P01768 117 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 IGHV3-30-5P0DP03 117 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 C16orf74Q96GX8 76 aa11.56□□□□□ -0.56
COL5A1-208ENST00000618395 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 FAM30AQ9NZY2 134 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 UFSP1Q6NVU6 142 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 IGLV3-19P01714 112 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 SRCAPQ6ZRS2 3230 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 C3orf84H3BNL1 204 aa11.55□□□□□ -0.56
COL5A1-208ENST00000618395 Q8N976 141 aa11.54□□□□□ -0.56
COL5A1-208ENST00000618395 LINC00308Q8TCZ7 52 aa11.54□□□□□ -0.56
COL5A1-208ENST00000618395 MYO9AB2RTY4 2548 aa11.54□□□□□ -0.56
COL5A1-208ENST00000618395 SIRPDQ9H106 197 aa11.54□□□□□ -0.56
COL5A1-208ENST00000618395 C20orf203Q8NBC4 194 aa11.53□□□□□ -0.56
COL5A1-208ENST00000618395 MAPKAPK5-AS1Q8N8E1 139 aa11.53□□□□□ -0.56
COL5A1-208ENST00000618395 NPBQ8NG41 125 aa11.53□□□□□ -0.56
COL5A1-208ENST00000618395 C9orf85Q96MD7 179 aa11.53□□□□□ -0.56
COL5A1-208ENST00000618395 H3BUA1 57 aa11.52□□□□□ -0.56
COL5A1-208ENST00000618395 MBD3L4A6NDZ8 208 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-208ENST00000618395 MBD3L3A6NE82 208 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-208ENST00000618395 MBD3L5A6NJ08 208 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-208ENST00000618395 RPS28P62857 69 aaKnown RBP11.52□□□□□ -0.57
COL5A1-208ENST00000618395 B9D2Q9BPU9 175 aa11.52□□□□□ -0.57
COL5A1-208ENST00000618395 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
COL5A1-208ENST00000618395 CPAMD8Q8IZJ3 1885 aa11.51□□□□□ -0.57
COL5A1-208ENST00000618395 CXCL6P80162 114 aa11.51□□□□□ -0.57
COL5A1-208ENST00000618395 C1orf158Q8N1D5 194 aa11.51□□□□□ -0.57
COL5A1-208ENST00000618395 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
COL5A1-208ENST00000618395 CACNA1AO00555 2505 aa11.51□□□□□ -0.57
COL5A1-208ENST00000618395 C22orf34Q6ZV56 151 aa11.5□□□□□ -0.57
COL5A1-208ENST00000618395 GDF5OSQ5U4N7 250 aa11.49□□□□□ -0.57
COL5A1-208ENST00000618395 LIMD2Q9BT23 127 aa11.49□□□□□ -0.57
COL5A1-208ENST00000618395 HHLA3Q9XRX5 114 aa11.49□□□□□ -0.57
COL5A1-208ENST00000618395 COL8A2P25067 703 aa11.49□□□□□ -0.57
COL5A1-208ENST00000618395 KLK5Q9Y337 293 aaPredicted RBP11.49□□□□□ -0.57
COL5A1-208ENST00000618395 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
COL5A1-208ENST00000618395 IBA57-AS1B1ANH7 110 aa11.48□□□□□ -0.57
COL5A1-208ENST00000618395 APRG1Q8IVJ8 170 aa11.48□□□□□ -0.57
COL5A1-208ENST00000618395 ACACBO00763 2458 aa11.48□□□□□ -0.57
COL5A1-208ENST00000618395 CRYGDP07320 174 aa11.48□□□□□ -0.57
COL5A1-208ENST00000618395 C4orf26Q17RF5 130 aa11.47□□□□□ -0.57
COL5A1-208ENST00000618395 PROK2Q9HC23 129 aa11.47□□□□□ -0.57
COL5A1-208ENST00000618395 F8P00451 2351 aa11.47□□□□□ -0.57
COL5A1-208ENST00000618395 ZFYVE26Q68DK2 2539 aa11.46□□□□□ -0.57
COL5A1-208ENST00000618395 IGLV3-1P01715 115 aa11.46□□□□□ -0.57
COL5A1-208ENST00000618395 UBE2D2P62837 147 aa11.46□□□□□ -0.57
COL5A1-208ENST00000618395 ESRGQ1W209 222 aa11.46□□□□□ -0.57
COL5A1-208ENST00000618395 CSRP1P21291 193 aaKnown RBP11.46□□□□□ -0.58
COL5A1-208ENST00000618395 CCDC168Q8NDH2 2452 aa11.46□□□□□ -0.58
COL5A1-208ENST00000618395 TRBV6-5A0A0K0K1A5 114 aa11.46□□□□□ -0.58
COL5A1-208ENST00000618395 I3L2K1 104 aa11.46□□□□□ -0.58
COL5A1-208ENST00000618395 RUSC1-AS1Q66K80 236 aa11.46□□□□□ -0.58
COL5A1-208ENST00000618395 BPESC1Q9GZL8 116 aa11.46□□□□□ -0.58
COL5A1-208ENST00000618395 TRBV10-1A0A0K0K1A3 114 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 B3GALT5-AS1P59052 145 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 PATE2Q6UY27 113 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 EPOPA6NHQ4 379 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 ZNF462Q96JM2 2506 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 A0A0G2JNJ9 132 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 Q9UFV3 132 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 TP53TG3Q9ULZ0 132 aa11.45□□□□□ -0.58
COL5A1-208ENST00000618395 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
COL5A1-208ENST00000618395 K7EIM0 57 aa11.44□□□□□ -0.58
COL5A1-208ENST00000618395 IGHV4-38-2P0DP08 117 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 U3KQK5 164 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 SPAG11AQ6PDA7 123 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 TRBV7-7A0A0K0K1E9 115 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 ZMAT4Q9H898 229 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
COL5A1-208ENST00000618395 MUC6Q6W4X9 2439 aa11.42□□□□□ -0.58
COL5A1-208ENST00000618395 LY6DQ14210 128 aa11.42□□□□□ -0.58
COL5A1-208ENST00000618395 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
COL5A1-208ENST00000618395 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
COL5A1-208ENST00000618395 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
COL5A1-208ENST00000618395 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
COL5A1-208ENST00000618395 E7EQL1 145 aa11.41□□□□□ -0.58
COL5A1-208ENST00000618395 MSMBP08118 114 aa11.41□□□□□ -0.58
COL5A1-208ENST00000618395 LY6HO94772 140 aa11.41□□□□□ -0.58
COL5A1-208ENST00000618395 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
COL5A1-208ENST00000618395 CEMP1Q6PRD7 247 aaPredicted RBP11.4□□□□□ -0.58
COL5A1-208ENST00000618395 IGLV11-55A0A075B6I3 123 aa11.4□□□□□ -0.58
COL5A1-208ENST00000618395 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.58
COL5A1-208ENST00000618395 IGHV4-30-4P0DP06 118 aa11.4□□□□□ -0.58
COL5A1-208ENST00000618395 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
COL5A1-208ENST00000618395 RAI1Q7Z5J4 1906 aaPredicted RBP11.4□□□□□ -0.59
COL5A1-208ENST00000618395 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
COL5A1-208ENST00000618395 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
COL5A1-208ENST00000618395 Q8N9W7 124 aa11.39□□□□□ -0.59
COL5A1-208ENST00000618395 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
COL5A1-208ENST00000618395 PYGO1Q9Y3Y4 419 aa11.39□□□□□ -0.59
COL5A1-208ENST00000618395 Q8N6K4 173 aa11.39□□□□□ -0.59
COL5A1-208ENST00000618395 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms