RNA–Protein interactions for RNA: ENST00000618002.4

RPH3AL-222, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 5 BASIC

Gene RPH3AL, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-222ENST00000618002 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
RPH3AL-222ENST00000618002 SPANXCQ9NY87 97 aa12.68□□□□□ -0.38
RPH3AL-222ENST00000618002 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
RPH3AL-222ENST00000618002 TRAV8-4A0A0B4J246 113 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 H7C423 109 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 VSIG2Q96IQ7 327 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 DUX5Q96PT3 197 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 H3BMM0 161 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 PRM2P04554 102 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 GAGE5Q13069 117 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 GAGE6Q13070 117 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 C2orf82Q6UX34 121 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 UBE2WQ96B02 151 aa12.67□□□□□ -0.38
RPH3AL-222ENST00000618002 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 MIAQ16674 131 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 NCOR2Q9Y618 2525 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 MSMBP08118 114 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 EDA2RQ9HAV5 297 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
RPH3AL-222ENST00000618002 CHD8Q9HCK8 2581 aa12.65□□□□□ -0.38
RPH3AL-222ENST00000618002 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.39
RPH3AL-222ENST00000618002 Q6ZSN1 163 aa12.65□□□□□ -0.39
RPH3AL-222ENST00000618002 RNF152Q8N8N0 203 aa12.65□□□□□ -0.39
RPH3AL-222ENST00000618002 CLEC2BQ92478 149 aa12.65□□□□□ -0.39
RPH3AL-222ENST00000618002 SS18L2Q9UHA2 77 aa12.65□□□□□ -0.39
RPH3AL-222ENST00000618002 ITPR1Q14643 2758 aa12.64□□□□□ -0.39
RPH3AL-222ENST00000618002 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
RPH3AL-222ENST00000618002 B5MCH6 92 aa12.64□□□□□ -0.39
RPH3AL-222ENST00000618002 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
RPH3AL-222ENST00000618002 CHCHD7Q9BUK0 85 aa12.64□□□□□ -0.39
RPH3AL-222ENST00000618002 CCL19Q99731 98 aa12.63□□□□□ -0.39
RPH3AL-222ENST00000618002 UBE2D4Q9Y2X8 147 aa12.63□□□□□ -0.39
RPH3AL-222ENST00000618002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.63□□□□□ -0.39
RPH3AL-222ENST00000618002 IGKV2-29A2NJV5 120 aaPredicted RBP12.63□□□□□ -0.39
RPH3AL-222ENST00000618002 COX6CP09669 75 aa12.63□□□□□ -0.39
RPH3AL-222ENST00000618002 TMEM61Q8N0U2 210 aa12.63□□□□□ -0.39
RPH3AL-222ENST00000618002 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
RPH3AL-222ENST00000618002 IFITM1P13164 125 aa12.62□□□□□ -0.39
RPH3AL-222ENST00000618002 DAND5Q8N907 189 aa12.62□□□□□ -0.39
RPH3AL-222ENST00000618002 ATP5J2P56134 94 aa12.61□□□□□ -0.39
RPH3AL-222ENST00000618002 SPANXA1Q9NS26 97 aa12.61□□□□□ -0.39
RPH3AL-222ENST00000618002 H3BT86 120 aa12.6□□□□□ -0.39
RPH3AL-222ENST00000618002 LST1O00453 97 aa12.6□□□□□ -0.39
RPH3AL-222ENST00000618002 GNLYP22749 145 aa12.6□□□□□ -0.39
RPH3AL-222ENST00000618002 Q6Q795 121 aa12.6□□□□□ -0.39
RPH3AL-222ENST00000618002 LINC00467Q9BRT7 94 aa12.6□□□□□ -0.39
RPH3AL-222ENST00000618002 DEFB112Q30KQ8 113 aa12.6□□□□□ -0.39
RPH3AL-222ENST00000618002 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 IGHV3-38A0A0C4DH36 116 aa12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 CCDC179H3BU77 68 aa12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 HOXD3P31249 432 aaPredicted RBP12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 DUX3Q96PT4 197 aa12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 YAE1D1Q9NRH1 226 aa12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 CDKN2A-AS1Q9UH64 79 aa12.59□□□□□ -0.39
RPH3AL-222ENST00000618002 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
RPH3AL-222ENST00000618002 TMEM89A2RUT3 159 aa12.58□□□□□ -0.4
RPH3AL-222ENST00000618002 CSMD2Q7Z408 3487 aa12.58□□□□□ -0.4
RPH3AL-222ENST00000618002 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 GAGE12JA6NER3 117 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 GAGE7O76087 117 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 DEFB131AP59861 70 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 GAGE4Q13068 117 aa12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.57□□□□□ -0.4
RPH3AL-222ENST00000618002 TIMM17BO60830 172 aa12.56□□□□□ -0.4
RPH3AL-222ENST00000618002 B4DSR2 109 aa12.56□□□□□ -0.4
RPH3AL-222ENST00000618002 TMEM101Q96IK0 257 aa12.56□□□□□ -0.4
RPH3AL-222ENST00000618002 CITED2Q99967 270 aaPredicted RBP12.56□□□□□ -0.4
RPH3AL-222ENST00000618002 DEFB121Q5J5C9 76 aa12.55□□□□□ -0.4
RPH3AL-222ENST00000618002 NDUFA1O15239 70 aa12.54□□□□□ -0.4
RPH3AL-222ENST00000618002 COX6A2Q02221 97 aa12.54□□□□□ -0.4
RPH3AL-222ENST00000618002 ZANQ9Y493 2812 aa12.54□□□□□ -0.4
RPH3AL-222ENST00000618002 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
RPH3AL-222ENST00000618002 IGLV5-45A0A087WSX0 123 aa12.52□□□□□ -0.4
RPH3AL-222ENST00000618002 IGHV3-53P01767 116 aa12.52□□□□□ -0.4
RPH3AL-222ENST00000618002 TIRAPP58753 221 aa12.52□□□□□ -0.4
RPH3AL-222ENST00000618002 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.4
RPH3AL-222ENST00000618002 FAM240AA0A1B0GVK7 77 aa12.52□□□□□ -0.41
RPH3AL-222ENST00000618002 A8MTW9 85 aa12.52□□□□□ -0.41
RPH3AL-222ENST00000618002 PIK3CD-AS1Q5SR53 167 aa12.52□□□□□ -0.41
RPH3AL-222ENST00000618002 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 UBE2E2Q96LR5 201 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 A0A0U1RRA0 63 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 SLURP1P55000 103 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 DEFB136Q30KP8 78 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 MXRA5Q9NR99 2828 aa12.51□□□□□ -0.41
RPH3AL-222ENST00000618002 C18orf65Q6ZTR6 163 aa12.5□□□□□ -0.41
RPH3AL-222ENST00000618002 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
RPH3AL-222ENST00000618002 Q9H8V8 135 aa12.5□□□□□ -0.41
RPH3AL-222ENST00000618002 FLNCQ14315 2725 aa12.5□□□□□ -0.41
RPH3AL-222ENST00000618002 IGHV3OR16-12A0A075B7B8 117 aa12.5□□□□□ -0.41
RPH3AL-222ENST00000618002 CIRBPQ14011 172 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms