RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ZNF462Q96JM2 2506 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 ADARB2-AS1A8MUL3 147 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 FOXI1Q12951 378 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 Q6YL49 198 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 C10orf126Q8N4M7 172 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 H7C2G1 150 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 J3QLI3 93 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 CD28P10747 220 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 SMIM20Q8N5G0 67 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 C1QTNF4Q9BXJ3 329 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 RBMY1BA6NDE4 496 aaKnown RBP8.63□□□□□ -1.03
C11orf54-215ENST00000617482 RBMY1EA6NEQ0 496 aaKnown RBP8.63□□□□□ -1.03
C11orf54-215ENST00000617482 H3BMM0 161 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 RBMY1DP0C7P1 496 aaKnown RBP8.63□□□□□ -1.03
C11orf54-215ENST00000617482 Q6ZSN1 163 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
C11orf54-215ENST00000617482 MUSTN1Q8IVN3 82 aa8.62□□□□□ -1.03
C11orf54-215ENST00000617482 FAM104AQ969W3 186 aa8.62□□□□□ -1.03
C11orf54-215ENST00000617482 LRRK2Q5S007 2527 aa8.62□□□□□ -1.03
C11orf54-215ENST00000617482 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
C11orf54-215ENST00000617482 LYRM7Q5U5X0 104 aa8.62□□□□□ -1.03
C11orf54-215ENST00000617482 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
C11orf54-215ENST00000617482 KHDC1LQ5JSQ8 128 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 TMEM61Q8N0U2 210 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 USP24Q9UPU5 2620 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 ABCA12Q86UK0 2595 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 TRAV8-3A0A0A6YYJ7 113 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 KRTAP10-9P60411 292 aa8.61□□□□□ -1.03
C11orf54-215ENST00000617482 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 M0R2P5 195 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 BBC3Q96PG8 261 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-215ENST00000617482 TEX15Q9BXT5 2789 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 IGHV3-38A0A0C4DH36 116 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 IGHV4-31P0DP07 118 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 LINC01587Q99440 93 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
C11orf54-215ENST00000617482 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-215ENST00000617482 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-215ENST00000617482 A8MZ25 164 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 TMEM263Q8WUH6 116 aaKnown RBP8.59□□□□□ -1.03
C11orf54-215ENST00000617482 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 PTPN13Q12923 2485 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 A8MWV9 139 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 FSHBP01225 129 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 PRSS2P07478 247 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
C11orf54-215ENST00000617482 ATP6V0E2Q8NHE4 81 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
C11orf54-215ENST00000617482 ZNF415Q09FC8 603 aa8.58□□□□□ -1.04
C11orf54-215ENST00000617482 Q1RN00 199 aa8.58□□□□□ -1.04
C11orf54-215ENST00000617482 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
C11orf54-215ENST00000617482 MYO9AB2RTY4 2548 aa8.58□□□□□ -1.04
C11orf54-215ENST00000617482 FHL3Q13643 280 aa8.57□□□□□ -1.04
C11orf54-215ENST00000617482 DYNLRB2Q8TF09 96 aa8.57□□□□□ -1.04
C11orf54-215ENST00000617482 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
C11orf54-215ENST00000617482 MAP6D1Q9H9H5 199 aa8.57□□□□□ -1.04
C11orf54-215ENST00000617482 EDA2RQ9HAV5 297 aa8.57□□□□□ -1.04
C11orf54-215ENST00000617482 PEMTQ9UBM1 199 aa8.57□□□□□ -1.04
C11orf54-215ENST00000617482 ZNF469Q96JG9 3925 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-215ENST00000617482 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 LINC00467Q9BRT7 94 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 A8MTW9 85 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 C9JAW5 83 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 NPC2P61916 151 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 PPDPFLQ8WWR9 84 aa8.56□□□□□ -1.04
C11orf54-215ENST00000617482 A0A0B4J2C4 111 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 IGHV1-58A0A0C4DH39 117 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 GAGE5Q13069 117 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 GAGE6Q13070 117 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 Q6ZUT4 128 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 ANKRD29Q8N6D5 301 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 LITAFQ99732 161 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 NDUFA12Q9UI09 145 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 CR1P17927 2039 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
C11orf54-215ENST00000617482 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
C11orf54-215ENST00000617482 SLC25A20O43772 301 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 C4orf3Q8WVX3 66 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 PRRC2AP48634 2157 aaKnown RBP8.54□□□□□ -1.04
C11orf54-215ENST00000617482 TLN2Q9Y4G6 2542 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 TINCRA0A1B0GVN0 87 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 C11orf44Q8N8P7 122 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
C11orf54-215ENST00000617482 UBR5O95071 2799 aaPredicted RBP8.54□□□□□ -1.04
C11orf54-215ENST00000617482 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
C11orf54-215ENST00000617482 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
C11orf54-215ENST00000617482 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms