RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ADARB2-AS1A8MUL3 147 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 I3L3M4 83 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 PF4P02776 101 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 MED14OSP0DP75 135 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 SLURP1P55000 103 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 SUMO4Q6EEV6 95 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRAV12-1A0A0B4J245 112 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGLL5B9A064 214 aa4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 RNASE3P12724 160 aaKnown RBP4.24□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGHV3-38A0A0C4DH36 116 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 TMEM89A2RUT3 159 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 PRIMA1Q86XR5 153 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 E9PLD3 99 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 LINC01619G3V211 115 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 NRACQ8N912 160 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 PRORYQ9H606 182 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 PRO1854Q9UHT4 67 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 POLR2KP53803 58 aaKnown RBP4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 KLLNB2CW77 178 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 DEFB130BP0DP73 79 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 DEFB130AP0DP74 79 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 RHOHQ15669 191 aa4.23□□□□□ -1.73
SYNCRIP-204ENST00000616122 WFDC2Q14508 124 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 DCHS1Q96JQ0 3298 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 RNASE13Q5GAN3 156 aaKnown RBP4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 USP34Q70CQ2 3546 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 IGLV1-40P01703 118 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 APRG1Q8IVJ8 170 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 CEND1Q8N111 149 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 GAGE12JA6NER3 117 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 GAGE4Q13068 117 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 GAGE5Q13069 117 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 MAPKAPK5-AS1Q8N8E1 139 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 H3BMM0 161 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 A4D1N5 150 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 MORN3Q6PF18 240 aaPredicted RBP4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 SIGMAR1Q99720 223 aa4.22□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.73
SYNCRIP-204ENST00000616122 TRBV27A0A0K0K1C4 114 aa4.21□□□□□ -1.73
SYNCRIP-204ENST00000616122 PSMB8P28062 276 aa4.21□□□□□ -1.73
SYNCRIP-204ENST00000616122 TENM4Q6N022 2769 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 C9JAW5 83 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 RPL35AP18077 110 aaKnown RBP4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 CRIP2P52943 208 aaPredicted RBP4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 C1orf158Q8N1D5 194 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 ANKRD29Q8N6D5 301 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 DCANP1Q8TF63 244 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 TMEM262E9PQX1 116 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 F8W1H4 67 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 RBX1P62877 108 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
SYNCRIP-204ENST00000616122 M0R2P5 195 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 CRYGDP07320 174 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 TTC32Q5I0X7 151 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 NEXN-AS1Q8NBZ9 246 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE7O76087 117 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE12FP0CL80 117 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE12GP0CL81 117 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 GAGE12IP0CL82 117 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 CMC4P56277 68 aaPredicted RBP4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 CFC1P0CG37 223 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 NPC2P61916 151 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 OR13C6PQ8NH95 151 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 TSSC4Q9Y5U2 329 aaPredicted RBP4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 M0QY20 66 aa4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 CEMP1Q6PRD7 247 aaPredicted RBP4.2□□□□□ -1.74
SYNCRIP-204ENST00000616122 KRTAP10-9P60411 292 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 PTPRBP23467 1997 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 TENM3Q9P273 2699 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGKV2-29A2NJV5 120 aaPredicted RBP4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 HTN3P15516 51 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 NSUN5P1Q3KNT7 163 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 COPS9Q8WXC6 57 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 CHKB-CPT1BH3BT56 60 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 CCL24O00175 119 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 AZU1P20160 251 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 A0A0J9YY99 117 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 TRBV6-5A0A0K0K1A5 114 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 PSMG3-AS1Q96PY0 264 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 BRI3O95415 125 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 EDN2P20800 178 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 SPANXA1Q9NS26 97 aa4.19□□□□□ -1.74
SYNCRIP-204ENST00000616122 HRNRQ86YZ3 2850 aaPredicted RBP4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 CRLF1O75462 422 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGHV3-30-3P0DP02 117 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 CFHR3Q02985 330 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 ODF3Q96PU9 254 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 IGLV2-18A0A075B6J9 118 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 A0A1B0GV72 72 aa4.18□□□□□ -1.74
SYNCRIP-204ENST00000616122 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms