RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TRBV6-5A0A0K0K1A5 114 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 KNCNA6PVL3 124 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 J3QQQ9 107 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 DOPEY1Q5JWR5 2465 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 LINC01619G3V211 115 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 GAGE7O76087 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 GAGE12FP0CL80 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 GAGE12GP0CL81 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 GAGE12IP0CL82 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 GAGE4Q13068 117 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 KRTAP1-3Q8IUG1 177 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 Q8N1Y9 231 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 C10orf126Q8N4M7 172 aa8.04□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 PRM2P04554 102 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 SDHAF1A6NFY7 115 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 SNRPD3P62318 126 aaKnown RBP8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 TMEM262E9PQX1 116 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 CCDC168Q8NDH2 2452 aa8.03□□□□□ -1.12
SENP3-EIF4A1-201ENST00000614237 IFITM1P13164 125 aa8.02□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 EDN2P20800 178 aa8.02□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 ZNRF2Q8NHG8 242 aa8.02□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 NRGNQ92686 78 aa8.02□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 VPS13CQ709C8 3753 aa8.02□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TENM4Q6N022 2769 aa8.02□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 DUX5Q96PT3 197 aa8.01□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGHV3-16A0A0C4DH30 117 aa8.01□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 CRYBG3Q68DQ2 2970 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 CRYGDP07320 174 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 P0DMU3 169 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 FAM231AP0DMU4 169 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 FAM231CP0DMU5 169 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 UBE2D1P51668 147 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 PMVKQ15126 192 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 C4orf3Q8WVX3 66 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 MUC4Q99102 2169 aa8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 UBR5O95071 2799 aaPredicted RBP8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 NHLRC4P0CG21 123 aaPredicted RBP8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 GCN1Q92616 2671 aaKnown RBP8□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TSHBP01222 138 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGHV3-30P01768 117 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGHV3-30-5P0DP03 117 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGHV3-38A0A0C4DH36 116 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 HOXD3P31249 432 aaPredicted RBP7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TRBV27A0A0K0K1C4 114 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 LINC01620Q4KN68 170 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 SUMO4Q6EEV6 95 aa7.99□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 UBE2D3P61077 147 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 UBE2D2P62837 147 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 ZNF22P17026 224 aaPredicted RBP7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 C10orf99Q6UWK7 81 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 VCX2Q9H322 139 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 H3BMM0 161 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 HIST2H2BDQ6DRA6 164 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 UBE2WQ96B02 151 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TMEM141Q96I45 108 aa7.98□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGLV4-69A0A075B6H9 119 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGHV1OR15-1A0A075B7D0 117 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TRIAP1O43715 76 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 NAV2Q8IVL1 2488 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 CSMD2Q7Z408 3487 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 VCYO14598 125 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TIMM17AQ99595 171 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 PEMTQ9UBM1 199 aa7.97□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 TRGV11A0A075B6L2 103 aa7.96□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 KRTAP10-9P60411 292 aa7.96□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 KLK5Q9Y337 293 aaPredicted RBP7.96□□□□□ -1.13
SENP3-EIF4A1-201ENST00000614237 IGIPA6NJ69 53 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 PROK1P58294 105 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 CD28P10747 220 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 SYNJ2BPP57105 145 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 ATXN8Q156A1 80 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 SPINK13Q1W4C9 94 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 PAPPA-AS1Q5QFB9 102 aa7.96□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 TRAV25A0A0B4J276 109 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 RHOHQ15669 191 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 NSUN5P1Q3KNT7 163 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 SLC25A29Q8N8R3 303 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 ATP6V0E2Q8NHE4 81 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 M0QY20 66 aa7.94□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 RHODO00212 210 aa7.94□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 M0R2P5 195 aa7.94□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 RPL13AP40429 203 aaKnown RBP7.94□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 Q96MF0 132 aa7.94□□□□□ -1.14
SENP3-EIF4A1-201ENST00000614237 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms