RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 NHP2Q9NX24 153 aaKnown RBP8.64□□□□□ -1.03
SRRT-213ENST00000611405 IGLV4-3A0A075B6K6 122 aa8.64□□□□□ -1.03
SRRT-213ENST00000611405 F8WDY8 70 aa8.64□□□□□ -1.03
SRRT-213ENST00000611405 OPRPNQ99935 248 aaPredicted RBP8.64□□□□□ -1.03
SRRT-213ENST00000611405 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
SRRT-213ENST00000611405 K7EP34 96 aa8.64□□□□□ -1.03
SRRT-213ENST00000611405 AZU1P20160 251 aa8.64□□□□□ -1.03
SRRT-213ENST00000611405 PHLDA1Q8WV24 401 aaPredicted RBP8.64□□□□□ -1.03
SRRT-213ENST00000611405 KMT2BQ9UMN6 2715 aaPredicted RBP8.63□□□□□ -1.03
SRRT-213ENST00000611405 CRYBA4P53673 196 aa8.63□□□□□ -1.03
SRRT-213ENST00000611405 SAMD5Q5TGI4 173 aa8.63□□□□□ -1.03
SRRT-213ENST00000611405 IL17DQ8TAD2 202 aa8.63□□□□□ -1.03
SRRT-213ENST00000611405 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
SRRT-213ENST00000611405 FABP2P12104 132 aa8.63□□□□□ -1.03
SRRT-213ENST00000611405 NAA38Q9BRA0 125 aaKnown RBP8.63□□□□□ -1.03
SRRT-213ENST00000611405 K7ERJ3 54 aa8.62□□□□□ -1.03
SRRT-213ENST00000611405 IGLV1-51P01701 117 aa8.62□□□□□ -1.03
SRRT-213ENST00000611405 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
SRRT-213ENST00000611405 C12orf74Q32Q52 190 aa8.62□□□□□ -1.03
SRRT-213ENST00000611405 IGHV3OR16-12A0A075B7B8 117 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 ADARB2-AS1A8MUL3 147 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 AMELXQ99217 191 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 SPANXA1Q9NS26 97 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
SRRT-213ENST00000611405 A0A1B0GWB2 263 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 CHCHD7Q9BUK0 85 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 Q9UF83 564 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 LEPROTO15243 131 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 TMEM263Q8WUH6 116 aaKnown RBP8.6□□□□□ -1.03
SRRT-213ENST00000611405 TRGV1A0A0A0MS02 117 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 J3QQQ9 107 aa8.6□□□□□ -1.03
SRRT-213ENST00000611405 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
SRRT-213ENST00000611405 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
SRRT-213ENST00000611405 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
SRRT-213ENST00000611405 A0A0J9YY99 117 aa8.59□□□□□ -1.03
SRRT-213ENST00000611405 IGLL5B9A064 214 aa8.59□□□□□ -1.03
SRRT-213ENST00000611405 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
SRRT-213ENST00000611405 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
SRRT-213ENST00000611405 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
SRRT-213ENST00000611405 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
SRRT-213ENST00000611405 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
SRRT-213ENST00000611405 C19orf73Q9NVV2 129 aa8.58□□□□□ -1.04
SRRT-213ENST00000611405 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
SRRT-213ENST00000611405 ACANP16112 2415 aa8.58□□□□□ -1.04
SRRT-213ENST00000611405 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
SRRT-213ENST00000611405 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
SRRT-213ENST00000611405 SMR3AQ99954 134 aa8.58□□□□□ -1.04
SRRT-213ENST00000611405 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
SRRT-213ENST00000611405 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 TRAV4A0A0B4J268 109 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 NDUFA11Q86Y39 141 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 C1QTNF4Q9BXJ3 329 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 HELZ2Q9BYK8 2649 aaKnown RBP8.57□□□□□ -1.04
SRRT-213ENST00000611405 NF1P21359 2839 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 DAZ2Q13117 558 aaKnown RBP8.57□□□□□ -1.04
SRRT-213ENST00000611405 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 LY6G6DO95868 133 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
SRRT-213ENST00000611405 C16orf74Q96GX8 76 aa8.57□□□□□ -1.04
SRRT-213ENST00000611405 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
SRRT-213ENST00000611405 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
SRRT-213ENST00000611405 RRN3P1Q2M238 152 aa8.56□□□□□ -1.04
SRRT-213ENST00000611405 Q6ZTI0 123 aa8.56□□□□□ -1.04
SRRT-213ENST00000611405 WNK1Q9H4A3 2382 aa8.56□□□□□ -1.04
SRRT-213ENST00000611405 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
SRRT-213ENST00000611405 TINCRA0A1B0GVN0 87 aa8.55□□□□□ -1.04
SRRT-213ENST00000611405 K7EQD1 137 aa8.55□□□□□ -1.04
SRRT-213ENST00000611405 RPL36AP83881 106 aaKnown RBP8.55□□□□□ -1.04
SRRT-213ENST00000611405 RPL36ALQ969Q0 106 aaKnown RBP8.55□□□□□ -1.04
SRRT-213ENST00000611405 TIMM21Q9BVV7 248 aa8.55□□□□□ -1.04
SRRT-213ENST00000611405 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
SRRT-213ENST00000611405 GEMIN7Q9H840 131 aaKnown RBP8.55□□□□□ -1.04
SRRT-213ENST00000611405 UBE2D1P51668 147 aa8.55□□□□□ -1.04
SRRT-213ENST00000611405 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
SRRT-213ENST00000611405 OCIAD2Q56VL3 154 aa8.54□□□□□ -1.04
SRRT-213ENST00000611405 KRTAP10-3P60369 221 aa8.54□□□□□ -1.04
SRRT-213ENST00000611405 IGHV3-30P01768 117 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 IGHV3-30-5P0DP03 117 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 RBX1P62877 108 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 Q6ZUT4 128 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 DAZ4Q86SG3 579 aaKnown RBP8.53□□□□□ -1.04
SRRT-213ENST00000611405 CSNK1G2-AS1Q8NCQ2 148 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 DAZ3Q9NR90 486 aaKnown RBP8.53□□□□□ -1.04
SRRT-213ENST00000611405 MTORP42345 2549 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 RNASE13Q5GAN3 156 aaKnown RBP8.53□□□□□ -1.04
SRRT-213ENST00000611405 OVOL2Q9BRP0 275 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 PLAC8L1A1L4L8 177 aa8.53□□□□□ -1.04
SRRT-213ENST00000611405 IGHV3-30-3P0DP02 117 aa8.52□□□□□ -1.05
SRRT-213ENST00000611405 DGAT2L7PQ6IED9 249 aa8.52□□□□□ -1.05
SRRT-213ENST00000611405 LINC00482Q8N8I6 264 aa8.52□□□□□ -1.05
SRRT-213ENST00000611405 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
SRRT-213ENST00000611405 UBE2D3P61077 147 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms