RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 HIVEP2P31629 2446 aa11.92□□□□□ -0.5
RTN1-209ENST00000611068 TRBV10-2A0A0K0K1G8 114 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 UQCRQO14949 82 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 C4orf26Q17RF5 130 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 PSMB8P28062 276 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 SRSF2Q01130 221 aaKnown RBP11.91□□□□□ -0.5
RTN1-209ENST00000611068 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
RTN1-209ENST00000611068 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 KHDC1LQ5JSQ8 128 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 CYSTM1Q9H1C7 97 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 DEFB1P60022 68 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 TMEM263Q8WUH6 116 aaKnown RBP11.9□□□□□ -0.5
RTN1-209ENST00000611068 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
RTN1-209ENST00000611068 NIPBLQ6KC79 2804 aaeCLIP11.9□□□□□ -0.5
RTN1-209ENST00000611068 HERVK_113P61574 105 aa11.9□□□□□ -0.51
RTN1-209ENST00000611068 SLC25A29Q8N8R3 303 aa11.9□□□□□ -0.51
RTN1-209ENST00000611068 DNAJC9-AS1A6NH13 148 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 P0DMU3 169 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 FAM231AP0DMU4 169 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 FAM231CP0DMU5 169 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 Q1RN00 199 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 KIR2DL5BQ8NHK3 375 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 ERCC8Q13216 396 aa11.89□□□□□ -0.51
RTN1-209ENST00000611068 OXTP01178 125 aa11.88□□□□□ -0.51
RTN1-209ENST00000611068 HRCT1Q6UXD1 115 aa11.88□□□□□ -0.51
RTN1-209ENST00000611068 H7C423 109 aa11.88□□□□□ -0.51
RTN1-209ENST00000611068 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
RTN1-209ENST00000611068 C11orf86A6NJI1 115 aa11.87□□□□□ -0.51
RTN1-209ENST00000611068 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
RTN1-209ENST00000611068 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
RTN1-209ENST00000611068 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
RTN1-209ENST00000611068 ANK3Q12955 4377 aaKnown RBP11.87□□□□□ -0.51
RTN1-209ENST00000611068 WNK1Q9H4A3 2382 aa11.87□□□□□ -0.51
RTN1-209ENST00000611068 RPS28P62857 69 aaKnown RBP11.87□□□□□ -0.51
RTN1-209ENST00000611068 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
RTN1-209ENST00000611068 TOMM6Q96B49 74 aa11.86□□□□□ -0.51
RTN1-209ENST00000611068 SORL1Q92673 2214 aa11.86□□□□□ -0.51
RTN1-209ENST00000611068 H3BUA1 57 aa11.86□□□□□ -0.51
RTN1-209ENST00000611068 TRIAP1O43715 76 aa11.86□□□□□ -0.51
RTN1-209ENST00000611068 HIVEP1P15822 2718 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 FAM240AA0A1B0GVK7 77 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 NDUFA4O00483 81 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 SYNJ2BPP57105 145 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 COX8CQ7Z4L0 72 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
RTN1-209ENST00000611068 SMIM2Q9BVW6 85 aa11.85□□□□□ -0.51
RTN1-209ENST00000611068 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 A0A087WW49 117 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 A0A1W2PRX2 142 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
RTN1-209ENST00000611068 CRYGDP07320 174 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 Q6ZSV7 163 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 AMELXQ99217 191 aa11.84□□□□□ -0.51
RTN1-209ENST00000611068 SPRY2O43597 315 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 IGLV4-69A0A075B6H9 119 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 LY6G6DO95868 133 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 PDE6HQ13956 83 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 C2orf66Q6UXQ4 117 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
RTN1-209ENST00000611068 OVOL1O14753 267 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 TMEM190Q8WZ59 177 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 U3KQE9 123 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 COX7CP15954 63 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 MUSTN1Q8IVN3 82 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 DEFB104AQ8WTQ1 72 aa11.82□□□□□ -0.52
RTN1-209ENST00000611068 FN1P02751 2386 aaKnown RBP11.82□□□□□ -0.52
RTN1-209ENST00000611068 SLURP1P55000 103 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 Q5XG85 94 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 C11orf21Q9P2W6 132 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 F6UB75 175 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 DPH3Q96FX2 82 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 DSCR8Q96T75 97 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 IMUPQ9GZP8 106 aa11.81□□□□□ -0.52
RTN1-209ENST00000611068 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
RTN1-209ENST00000611068 A0A0B4J2C4 111 aa11.8□□□□□ -0.52
RTN1-209ENST00000611068 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
RTN1-209ENST00000611068 GPHB5Q86YW7 130 aa11.8□□□□□ -0.52
RTN1-209ENST00000611068 ZNRF2Q8NHG8 242 aa11.8□□□□□ -0.52
RTN1-209ENST00000611068 CLEC2BQ92478 149 aa11.8□□□□□ -0.52
RTN1-209ENST00000611068 ZNF256Q9Y2P7 627 aaPredicted RBP11.8□□□□□ -0.52
RTN1-209ENST00000611068 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
RTN1-209ENST00000611068 CRYGAP11844 174 aa11.79□□□□□ -0.52
RTN1-209ENST00000611068 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
RTN1-209ENST00000611068 ORMDL2Q53FV1 153 aa11.79□□□□□ -0.52
RTN1-209ENST00000611068 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
RTN1-209ENST00000611068 RPL39LQ96EH5 51 aaKnown RBP11.79□□□□□ -0.52
RTN1-209ENST00000611068 TSHBP01222 138 aa11.78□□□□□ -0.52
RTN1-209ENST00000611068 TRBV30A0A0K0K1B3 111 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms