RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
TNXB-208ENST00000611016 LINC00482Q8N8I6 264 aa11.78□□□□□ -0.52
TNXB-208ENST00000611016 FOXI1Q12951 378 aa11.78□□□□□ -0.52
TNXB-208ENST00000611016 C10orf99Q6UWK7 81 aa11.78□□□□□ -0.52
TNXB-208ENST00000611016 K7EQG2 157 aa11.77□□□□□ -0.52
TNXB-208ENST00000611016 ANKHD1Q8IWZ3 2542 aaKnown RBP11.77□□□□□ -0.52
TNXB-208ENST00000611016 IGKV2-24A0A0C4DH68 120 aa11.77□□□□□ -0.53
TNXB-208ENST00000611016 PTPN13Q12923 2485 aa11.77□□□□□ -0.53
TNXB-208ENST00000611016 DEFB131BA0A096LNP1 70 aa11.77□□□□□ -0.53
TNXB-208ENST00000611016 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
TNXB-208ENST00000611016 EBI3Q14213 229 aa11.77□□□□□ -0.53
TNXB-208ENST00000611016 NDUFC2O95298 119 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 TTTY13Q9BZ97 58 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 TNRC6AQ8NDV7 1962 aaKnown RBP11.76□□□□□ -0.53
TNXB-208ENST00000611016 Q6ZPA2 131 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 LINC00269Q8N2A0 174 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 KIR2DL5BQ8NHK3 375 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 CSPG4Q6UVK1 2322 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
TNXB-208ENST00000611016 Q6ZUT4 128 aa11.75□□□□□ -0.53
TNXB-208ENST00000611016 ZFAND2AQ8N6M9 145 aa11.75□□□□□ -0.53
TNXB-208ENST00000611016 C20orf173Q96LM9 149 aa11.75□□□□□ -0.53
TNXB-208ENST00000611016 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
TNXB-208ENST00000611016 FRMD6-AS1P0C7T7 363 aa11.75□□□□□ -0.53
TNXB-208ENST00000611016 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
TNXB-208ENST00000611016 WFDC9Q8NEX5 89 aa11.74□□□□□ -0.53
TNXB-208ENST00000611016 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
TNXB-208ENST00000611016 CRYGBP07316 175 aa11.74□□□□□ -0.53
TNXB-208ENST00000611016 REG3AQ06141 175 aa11.74□□□□□ -0.53
TNXB-208ENST00000611016 DSCAMO60469 2012 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 B5MCH6 92 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 LINC00643Q86TS7 51 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 SS18L2Q9UHA2 77 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 FAM236AA0A1B0GUQ0 79 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 FAM236BA0A1B0GV22 79 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 G3V4G9 280 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 J3KT08 172 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 CRYGDP07320 174 aa11.73□□□□□ -0.53
TNXB-208ENST00000611016 IGKV3D-7A0A0C4DH55 119 aa11.72□□□□□ -0.53
TNXB-208ENST00000611016 ATP5EP2Q5VTU8 51 aa11.72□□□□□ -0.53
TNXB-208ENST00000611016 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
TNXB-208ENST00000611016 MLST8Q9BVC4 326 aa11.72□□□□□ -0.53
TNXB-208ENST00000611016 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
TNXB-208ENST00000611016 IGLV2-8P01709 118 aa11.71□□□□□ -0.53
TNXB-208ENST00000611016 CRIP3Q6Q6R5 217 aa11.71□□□□□ -0.53
TNXB-208ENST00000611016 SPANXB1Q9NS25 103 aaPredicted RBP11.71□□□□□ -0.54
TNXB-208ENST00000611016 LINC00322Q6ZN03 302 aaPredicted RBP11.71□□□□□ -0.54
TNXB-208ENST00000611016 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
TNXB-208ENST00000611016 ZNF702PQ9H963 129 aa11.7□□□□□ -0.54
TNXB-208ENST00000611016 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
TNXB-208ENST00000611016 WFDC2Q14508 124 aa11.7□□□□□ -0.54
TNXB-208ENST00000611016 CLEC2BQ92478 149 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 PSMG3-AS1Q96PY0 264 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 ALPK3Q96L96 1907 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 NEXN-AS1Q8NBZ9 246 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 LINC01006Q8NI28 216 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 CEP192Q8TEP8 1941 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 MIFP14174 115 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 ZFAND3Q9H8U3 227 aa11.69□□□□□ -0.54
TNXB-208ENST00000611016 CHCHD10Q8WYQ3 142 aaPredicted RBP11.68□□□□□ -0.54
TNXB-208ENST00000611016 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
TNXB-208ENST00000611016 GDF5OSQ5U4N7 250 aa11.68□□□□□ -0.54
TNXB-208ENST00000611016 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
TNXB-208ENST00000611016 LINC00467Q9BRT7 94 aa11.67□□□□□ -0.54
TNXB-208ENST00000611016 ARHGAP21Q5T5U3 1957 aa11.67□□□□□ -0.54
TNXB-208ENST00000611016 MBD6Q96DN6 1003 aa11.67□□□□□ -0.54
TNXB-208ENST00000611016 C5orf47Q569G3 176 aa11.66□□□□□ -0.54
TNXB-208ENST00000611016 TNRC6BQ9UPQ9 1833 aaKnown RBP11.66□□□□□ -0.54
TNXB-208ENST00000611016 CDSNQ15517 529 aa11.66□□□□□ -0.54
TNXB-208ENST00000611016 U3KQK5 164 aa11.66□□□□□ -0.54
TNXB-208ENST00000611016 SEC61GP60059 68 aa11.66□□□□□ -0.54
TNXB-208ENST00000611016 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
TNXB-208ENST00000611016 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
TNXB-208ENST00000611016 YPEL4Q96NS1 127 aa11.65□□□□□ -0.54
TNXB-208ENST00000611016 NUP210LQ5VU65 1888 aa11.65□□□□□ -0.54
TNXB-208ENST00000611016 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
TNXB-208ENST00000611016 HIGD2AQ9BW72 106 aa11.65□□□□□ -0.54
TNXB-208ENST00000611016 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.55
TNXB-208ENST00000611016 CACNA1AO00555 2505 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 PCNX3Q9H6A9 2034 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 ZNF295-AS1Q8N0V1 137 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 C14orf132Q9NPU4 83 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 BPY2O14599 106 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 TIMM17BO60830 172 aa11.64□□□□□ -0.55
TNXB-208ENST00000611016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
TNXB-208ENST00000611016 Q6ZS46 218 aa11.63□□□□□ -0.55
TNXB-208ENST00000611016 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.62□□□□□ -0.55
TNXB-208ENST00000611016 H0Y9J4 135 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 TCL1BO95988 128 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 MUC7Q8TAX7 377 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 PRR14LQ5THK1 2151 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 UPK3BQ9BT76 320 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 WNK1Q9H4A3 2382 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 A0A087WZ39 114 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 TRAV10A0A0B4J240 114 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
TNXB-208ENST00000611016 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms