RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 DEFB104AQ8WTQ1 72 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 YAE1D1Q9NRH1 226 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 HECTD1Q9ULT8 2610 aa7.58□□□□□ -1.2
PABPC1-224ENST00000610907 FLNBO75369 2602 aaKnown RBP7.57□□□□□ -1.2
PABPC1-224ENST00000610907 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-224ENST00000610907 PROK1P58294 105 aa7.57□□□□□ -1.2
PABPC1-224ENST00000610907 MRPS36P82909 103 aaKnown RBP7.57□□□□□ -1.2
PABPC1-224ENST00000610907 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
PABPC1-224ENST00000610907 OPRPNQ99935 248 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-224ENST00000610907 CITED2Q99967 270 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-224ENST00000610907 F8W1H4 67 aa7.56□□□□□ -1.2
PABPC1-224ENST00000610907 COTL1Q14019 142 aa7.56□□□□□ -1.2
PABPC1-224ENST00000610907 Q6ZSN1 163 aa7.56□□□□□ -1.2
PABPC1-224ENST00000610907 C1orf158Q8N1D5 194 aa7.56□□□□□ -1.2
PABPC1-224ENST00000610907 ZNF418Q8TF45 676 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-224ENST00000610907 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
PABPC1-224ENST00000610907 XCL2Q9UBD3 114 aa7.56□□□□□ -1.2
PABPC1-224ENST00000610907 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 A0A1W2PRX2 142 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 CYSRT1A8MQ03 144 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 NDUFA7O95182 113 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 MRPL16Q9NX20 251 aaKnown RBP7.55□□□□□ -1.2
PABPC1-224ENST00000610907 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
PABPC1-224ENST00000610907 TINCRA0A1B0GVN0 87 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 CIDEAO60543 219 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 IGHV3-30P01768 117 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 PRM2P04554 102 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 IGHV3-30-5P0DP03 117 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 TMEM263Q8WUH6 116 aaKnown RBP7.54□□□□□ -1.2
PABPC1-224ENST00000610907 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 NBPF19A0A087WUL8 3843 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 AZU1P20160 251 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 HILS1P60008 231 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 C11orf44Q8N8P7 122 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 NACAE9PAV3 2078 aa7.54□□□□□ -1.2
PABPC1-224ENST00000610907 G3V4G9 280 aa7.53□□□□□ -1.2
PABPC1-224ENST00000610907 IGLV1-51P01701 117 aa7.53□□□□□ -1.2
PABPC1-224ENST00000610907 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
PABPC1-224ENST00000610907 DAZ2Q13117 558 aaKnown RBP7.53□□□□□ -1.2
PABPC1-224ENST00000610907 C1QTNF4Q9BXJ3 329 aa7.53□□□□□ -1.2
PABPC1-224ENST00000610907 PGPEP1Q9NXJ5 209 aa7.53□□□□□ -1.2
PABPC1-224ENST00000610907 TRAV4A0A0B4J268 109 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 IGHV1-58A0A0C4DH39 117 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 TMEM238C9JI98 176 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 SAP30O75446 220 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
PABPC1-224ENST00000610907 RNF151Q2KHN1 245 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 DAZ4Q86SG3 579 aaKnown RBP7.52□□□□□ -1.21
PABPC1-224ENST00000610907 NDUFA11Q86Y39 141 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
PABPC1-224ENST00000610907 VPS25Q9BRG1 176 aa7.52□□□□□ -1.21
PABPC1-224ENST00000610907 DAZ3Q9NR90 486 aaKnown RBP7.52□□□□□ -1.21
PABPC1-224ENST00000610907 TLN2Q9Y4G6 2542 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 TRGV1A0A0A0MS02 117 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 TIRAPP58753 221 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 RPL24P83731 157 aaKnown RBP7.51□□□□□ -1.21
PABPC1-224ENST00000610907 GAGE13Q4V321 117 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 HIST2H2BDQ6DRA6 164 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 Q9UF83 564 aa7.51□□□□□ -1.21
PABPC1-224ENST00000610907 CSDC2Q9Y534 153 aaKnown RBP7.51□□□□□ -1.21
PABPC1-224ENST00000610907 IGHV3OR16-12A0A075B7B8 117 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 CFC1P0CG37 223 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 UBE2D3P61077 147 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 UBE2D2P62837 147 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 C16orf74Q96GX8 76 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-224ENST00000610907 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-224ENST00000610907 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-224ENST00000610907 H3BMG7 143 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 K7EQD1 137 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 APOMO95445 188 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 TSPAN13O95857 204 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 CEMP1Q6PRD7 247 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-224ENST00000610907 FAM19A3Q7Z5A8 133 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 C10orf126Q8N4M7 172 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 VSIG2Q96IQ7 327 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 GEMIN7Q9H840 131 aaKnown RBP7.5□□□□□ -1.21
PABPC1-224ENST00000610907 C19orf73Q9NVV2 129 aa7.5□□□□□ -1.21
PABPC1-224ENST00000610907 SONP18583 2426 aaKnown RBP7.49□□□□□ -1.21
PABPC1-224ENST00000610907 FLNAP21333 2647 aaKnown RBP7.49□□□□□ -1.21
PABPC1-224ENST00000610907 A0A0B4J2C4 111 aa7.49□□□□□ -1.21
PABPC1-224ENST00000610907 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
PABPC1-224ENST00000610907 J3QR89 54 aa7.49□□□□□ -1.21
PABPC1-224ENST00000610907 GIG44P09565 113 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-224ENST00000610907 OVOL2Q9BRP0 275 aa7.49□□□□□ -1.21
PABPC1-224ENST00000610907 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1717.8 ms