RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 SYNJ2BPP57105 145 aa13.11□□□□□ -0.31
TNIP1-221ENST00000610874 M0QY20 66 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 Q6ZUT4 128 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 Q8N1Y9 231 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 ANKRD29Q8N6D5 301 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 CRYBA4P53673 196 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 DUX3Q96PT4 197 aa13.1□□□□□ -0.31
TNIP1-221ENST00000610874 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 TMEM223A0PJW6 202 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 P0DMU3 169 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 SPINK13Q1W4C9 94 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 ZNF580Q9UK33 172 aa13.09□□□□□ -0.31
TNIP1-221ENST00000610874 ANK3Q12955 4377 aaKnown RBP13.08□□□□□ -0.32
TNIP1-221ENST00000610874 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
TNIP1-221ENST00000610874 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
TNIP1-221ENST00000610874 LEPROTO15243 131 aa13.08□□□□□ -0.32
TNIP1-221ENST00000610874 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
TNIP1-221ENST00000610874 NSUN5P1Q3KNT7 163 aa13.08□□□□□ -0.32
TNIP1-221ENST00000610874 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
TNIP1-221ENST00000610874 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
TNIP1-221ENST00000610874 C9JAW5 83 aa13.07□□□□□ -0.32
TNIP1-221ENST00000610874 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
TNIP1-221ENST00000610874 ZNF22P17026 224 aaPredicted RBP13.07□□□□□ -0.32
TNIP1-221ENST00000610874 MUSTN1Q8IVN3 82 aa13.07□□□□□ -0.32
TNIP1-221ENST00000610874 RHOHQ15669 191 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 SBSPONQ8IVN8 264 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 K7EMT4 169 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 RHODO00212 210 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 SLC25A20O43772 301 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 Q1RN00 199 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 C20orf203Q8NBC4 194 aa13.06□□□□□ -0.32
TNIP1-221ENST00000610874 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
TNIP1-221ENST00000610874 A0A0J9YX75 114 aa13.05□□□□□ -0.32
TNIP1-221ENST00000610874 ADARB2-AS1A8MUL3 147 aa13.05□□□□□ -0.32
TNIP1-221ENST00000610874 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
TNIP1-221ENST00000610874 HOXD3P31249 432 aaPredicted RBP13.05□□□□□ -0.32
TNIP1-221ENST00000610874 VCX2Q9H322 139 aa13.05□□□□□ -0.32
TNIP1-221ENST00000610874 ERG28Q9UKR5 140 aa13.05□□□□□ -0.32
TNIP1-221ENST00000610874 TMEM263Q8WUH6 116 aaKnown RBP13.05□□□□□ -0.32
TNIP1-221ENST00000610874 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 HTN1P15515 57 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
TNIP1-221ENST00000610874 CLUHP3Q96NS8 147 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 I3L3M4 83 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 SLURP1P55000 103 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 YAE1D1Q9NRH1 226 aa13.04□□□□□ -0.32
TNIP1-221ENST00000610874 SPXQ9BT56 116 aa13.03□□□□□ -0.32
TNIP1-221ENST00000610874 ELANEP08246 267 aa13.03□□□□□ -0.32
TNIP1-221ENST00000610874 ESM1Q9NQ30 184 aa13.03□□□□□ -0.32
TNIP1-221ENST00000610874 SMR3AQ99954 134 aa13.02□□□□□ -0.32
TNIP1-221ENST00000610874 DNAJC9-AS1A6NH13 148 aa13.02□□□□□ -0.33
TNIP1-221ENST00000610874 UBE2E2Q96LR5 201 aa13.02□□□□□ -0.33
TNIP1-221ENST00000610874 RNASE13Q5GAN3 156 aaKnown RBP13.01□□□□□ -0.33
TNIP1-221ENST00000610874 KRTAP1-1Q07627 177 aa13.01□□□□□ -0.33
TNIP1-221ENST00000610874 CEMP1Q6PRD7 247 aaPredicted RBP13.01□□□□□ -0.33
TNIP1-221ENST00000610874 A0A0B4J2C4 111 aa13□□□□□ -0.33
TNIP1-221ENST00000610874 A0A0J9YXY3 114 aa13□□□□□ -0.33
TNIP1-221ENST00000610874 CD28P10747 220 aa13□□□□□ -0.33
TNIP1-221ENST00000610874 ODF3Q96PU9 254 aa13□□□□□ -0.33
TNIP1-221ENST00000610874 HIVEP2P31629 2446 aa13□□□□□ -0.33
TNIP1-221ENST00000610874 TMEM89A2RUT3 159 aa13□□□□□ -0.33
TNIP1-221ENST00000610874 TRAV8-3A0A0A6YYJ7 113 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 K7EQG2 157 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 PRSS2P07478 247 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 IGHV3-30-3P0DP02 117 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 PROK1P58294 105 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 Q6ZSV7 163 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 A0A1W2PRX2 142 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 OTOGQ6ZRI0 2925 aa12.99□□□□□ -0.33
TNIP1-221ENST00000610874 M0R2P5 195 aa12.98□□□□□ -0.33
TNIP1-221ENST00000610874 TIMM21Q9BVV7 248 aa12.98□□□□□ -0.33
TNIP1-221ENST00000610874 SETXQ7Z333 2677 aaKnown RBP12.98□□□□□ -0.33
TNIP1-221ENST00000610874 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.98□□□□□ -0.33
TNIP1-221ENST00000610874 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
TNIP1-221ENST00000610874 Q8N2B8 174 aa12.97□□□□□ -0.33
TNIP1-221ENST00000610874 TMEM262E9PQX1 116 aa12.96□□□□□ -0.33
TNIP1-221ENST00000610874 NPC2P61916 151 aa12.96□□□□□ -0.33
TNIP1-221ENST00000610874 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
TNIP1-221ENST00000610874 PRM2P04554 102 aa12.96□□□□□ -0.33
TNIP1-221ENST00000610874 ATXN8Q156A1 80 aa12.96□□□□□ -0.33
TNIP1-221ENST00000610874 RBMY1A1P0DJD3 496 aaKnown RBP12.95□□□□□ -0.34
TNIP1-221ENST00000610874 RBMY1CP0DJD4 496 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 RBMY1FQ15415 496 aaKnown RBP12.95□□□□□ -0.34
TNIP1-221ENST00000610874 LINC01620Q4KN68 170 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 NOTCH3Q9UM47 2321 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 TRGV11A0A075B6L2 103 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 TRIAP1O43715 76 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 RNF183Q96D59 192 aa12.95□□□□□ -0.34
TNIP1-221ENST00000610874 A8MZ25 164 aa12.94□□□□□ -0.34
TNIP1-221ENST00000610874 Q9UF83 564 aa12.94□□□□□ -0.34
TNIP1-221ENST00000610874 FAM104AQ969W3 186 aa12.94□□□□□ -0.34
TNIP1-221ENST00000610874 JMJD1CQ15652 2540 aa12.94□□□□□ -0.34
TNIP1-221ENST00000610874 ADAMTSL4-AS1Q5T5F5 129 aa12.93□□□□□ -0.34
TNIP1-221ENST00000610874 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms