RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
TPM1-233ENST00000610733 TRBV6-1A0A0K0K1D8 114 aa7.2□□□□□ -1.26
TPM1-233ENST00000610733 PRIMA1Q86XR5 153 aa7.2□□□□□ -1.26
TPM1-233ENST00000610733 USMG5Q96IX5 58 aa7.2□□□□□ -1.26
TPM1-233ENST00000610733 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 CFC1P0CG37 223 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 RNASE3P12724 160 aaKnown RBP7.19□□□□□ -1.26
TPM1-233ENST00000610733 CLPSL2Q6UWE3 100 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 NEXN-AS1Q8NBZ9 246 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 TMEM190Q8WZ59 177 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 TEX49A0A1B0GTD5 131 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 PFN2P35080 140 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 NDUFA11Q86Y39 141 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 FBN2P35556 2912 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 TEX15Q9BXT5 2789 aa7.19□□□□□ -1.26
TPM1-233ENST00000610733 CCDC179H3BU77 68 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 I3L3M4 83 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 HTN3P15516 51 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 CRIP2P52943 208 aaPredicted RBP7.18□□□□□ -1.26
TPM1-233ENST00000610733 NDUFV3P56181 108 aaKnown RBP7.18□□□□□ -1.26
TPM1-233ENST00000610733 STHQ8IWL8 128 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 DNAJC30Q96LL9 226 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 B4DSR2 109 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 DEFB130BP0DP73 79 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 DEFB130AP0DP74 79 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 TSPEAR-AS2P59090 65 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 C10orf126Q8N4M7 172 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 IGHV4OR15-8A0A075B7B6 117 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 A0A087WW49 117 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 LINC00158P58513 81 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 CHCHD5Q9BSY4 110 aa7.18□□□□□ -1.26
TPM1-233ENST00000610733 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
TPM1-233ENST00000610733 XGP55808 180 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 A0A0J9YY99 117 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 F5H768 121 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 DNAL4O96015 105 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 ATXN8Q156A1 80 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 TAL2Q16559 108 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 C18orf65Q6ZTR6 163 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 ATP6V0E2Q8NHE4 81 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 CARD19Q96LW7 228 aa7.17□□□□□ -1.26
TPM1-233ENST00000610733 C15orf53Q8NAA6 179 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 ITPR3Q14573 2671 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 TRGV11A0A075B6L2 103 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 AVPP01185 164 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 COX6B1P14854 86 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 MORN3Q6PF18 240 aaPredicted RBP7.16□□□□□ -1.26
TPM1-233ENST00000610733 TEN1Q86WV5 123 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 Q8N6K4 173 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 J3KT08 172 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 TMEM141Q96I45 108 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 ESM1Q9NQ30 184 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 Q9UF83 564 aa7.16□□□□□ -1.26
TPM1-233ENST00000610733 TRBV7-3A0A075B6L6 115 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 Q9H8V8 135 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 F8WDY8 70 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 H3BMM0 161 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 NXPH4O95158 308 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
TPM1-233ENST00000610733 TRGV4A0A0C4DH28 118 aa7.15□□□□□ -1.27
TPM1-233ENST00000610733 NDUFA7O95182 113 aa7.15□□□□□ -1.27
TPM1-233ENST00000610733 GAGE2AQ6NT46 116 aa7.15□□□□□ -1.27
TPM1-233ENST00000610733 MRAPQ8TCY5 172 aa7.15□□□□□ -1.27
TPM1-233ENST00000610733 CDIP1Q9H305 208 aa7.15□□□□□ -1.27
TPM1-233ENST00000610733 IGLV2-18A0A075B6J9 118 aa7.14□□□□□ -1.27
TPM1-233ENST00000610733 PAX4O43316 350 aa7.14□□□□□ -1.27
TPM1-233ENST00000610733 NBL1P41271 181 aa7.14□□□□□ -1.27
TPM1-233ENST00000610733 MRPL53Q96EL3 112 aaKnown RBP7.14□□□□□ -1.27
TPM1-233ENST00000610733 U3KQE9 123 aa7.14□□□□□ -1.27
TPM1-233ENST00000610733 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.14□□□□□ -1.27
TPM1-233ENST00000610733 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
TPM1-233ENST00000610733 C11orf71Q6IPW1 123 aa7.14□□□□□ -1.27
TPM1-233ENST00000610733 RHODO00212 210 aa7.13□□□□□ -1.27
TPM1-233ENST00000610733 TMEM61Q8N0U2 210 aa7.13□□□□□ -1.27
TPM1-233ENST00000610733 ATRQ13535 2644 aa7.13□□□□□ -1.27
TPM1-233ENST00000610733 LINC01620Q4KN68 170 aa7.13□□□□□ -1.27
TPM1-233ENST00000610733 ZNF415Q09FC8 603 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 IGHG2P01859 326 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 C20orf203Q8NBC4 194 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 NOP10Q9NPE3 64 aaKnown RBP7.12□□□□□ -1.27
TPM1-233ENST00000610733 EBI3Q14213 229 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 GPHB5Q86YW7 130 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 CNFNQ9BYD5 112 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 Q9HAA7 133 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 SPANXCQ9NY87 97 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 CDKN2A-AS1Q9UH64 79 aa7.12□□□□□ -1.27
TPM1-233ENST00000610733 A0A0J9YX75 114 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
TPM1-233ENST00000610733 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 LRRC75A-AS1Q8N1F1 130 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 LENEPQ9Y5L5 61 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 TINCRA0A1B0GVN0 87 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 ZMAT4Q9H898 229 aa7.11□□□□□ -1.27
TPM1-233ENST00000610733 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms