RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 A0A1B0GU33 70 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 C3orf84H3BNL1 204 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 IGLV3-19P01714 112 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 HRES1P13985 223 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 KISS1Q15726 138 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 SPANXN1Q5VSR9 72 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 LINC00269Q8N2A0 174 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 Q8NAQ8 132 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 ZNF563Q8TA94 476 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 XAGE1AQ9HD64 81 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 TNS1Q9HBL0 1735 aaKnown RBP2.75□□□□□ -1.97
LINC00397-202ENST00000606785 SHANK1Q9Y566 2161 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 MGAMO43451 1857 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 NRXN3Q9Y4C0 1643 aa2.75□□□□□ -1.97
LINC00397-202ENST00000606785 GREB1Q4ZG55 1949 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 NHSQ6T4R5 1651 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 IGLV3-9A0A075B6K5 115 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 TMSB15BA0A087X1C1 80 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 TRBV7-1A0A0A6YYK4 115 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 TRBV10-2A0A0K0K1G8 114 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 A6NIN4 97 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 CEBPZOSA8MTT3 80 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 IQCF6A8MYZ5 107 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 HMGN2P05204 90 aaKnown RBP2.74□□□□□ -1.97
LINC00397-202ENST00000606785 IGHV3-30-3P0DP02 117 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 DYNLT1P63172 113 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 NDUFA11Q86Y39 141 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 LYPD6Q86Y78 171 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 FAM223AQ8IWN6 122 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 Q96M85 177 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 SCGB3A1Q96QR1 104 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 TIMM21Q9BVV7 248 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 PAPPA2Q9BXP8 1791 aa2.74□□□□□ -1.97
LINC00397-202ENST00000606785 DOCK11Q5JSL3 2073 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 SCN7AQ01118 1682 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 LOC107984156A0A0G2JMH3 177 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 RTL8CO15255 209 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 GNRH2O43555 120 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 RPL27AP46776 148 aaKnown RBP2.73□□□□□ -1.97
LINC00397-202ENST00000606785 ATXN8Q156A1 80 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 Q6JHZ5 121 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 VMO1Q7Z5L0 202 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 ARL17AQ8IVW1 177 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 TMEM141Q96I45 108 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 TXNDC17Q9BRA2 123 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 NDUFA12Q9UI09 145 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 DLEC1Q9Y238 1755 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 TOGARAM1Q9Y4F4 1720 aa2.73□□□□□ -1.97
LINC00397-202ENST00000606785 SIP14410 1827 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 IFI27P40305 119 aaPredicted RBP2.72□□□□□ -1.97
LINC00397-202ENST00000606785 PLXNA3P51805 1871 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 DEFB134Q4QY38 66 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 C20orf197Q8N268 126 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 CYP4F30PQ9H0H9 118 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 LAMA4Q16363 1823 aa2.72□□□□□ -1.97
LINC00397-202ENST00000606785 PLXNA2O75051 1894 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 UBR3Q6ZT12 1888 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 C4AP0C0L4 1744 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 C4BP0C0L5 1744 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 KIAA1549LQ6ZVL6 1849 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 TRBV7-3A0A075B6L6 115 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 TRBV25-1A0A075B6N4 114 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 TEX49A0A1B0GTD5 131 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 PSCAO43653 123 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 PPYP01298 95 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 NPPCP23582 126 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 UBE2D1P51668 147 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 FXYD7P58549 80 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 TSPEAR-AS2P59090 65 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 PLGLAQ15195 96 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 LYPD1Q8N2G4 141 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 MUC7Q8TAX7 377 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 TTTY13Q9BZ97 58 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 PRO1854Q9UHT4 67 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 CD163L1Q9NR16 1453 aa2.71□□□□□ -1.98
LINC00397-202ENST00000606785 LTBP2Q14767 1821 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 LCTP09848 1927 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 COL4A6Q14031 1691 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 TMEM30CPA0ZSE6 113 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 LINC01549A6NIU2 74 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 FAM223BA6NKX1 122 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 CCL5P13501 91 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 ZNF22P17026 224 aaPredicted RBP2.7□□□□□ -1.98
LINC00397-202ENST00000606785 SERF2P84101 59 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 C2orf82Q6UX34 121 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 CLECL1Q8IZS7 167 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 PFN4Q8NHR9 129 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 RETNLBQ9BQ08 111 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 HIGD2AQ9BW72 106 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 BPESC1Q9GZL8 116 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 C11orf1Q9H5F2 150 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 NRAPQ86VF7 1730 aa2.7□□□□□ -1.98
LINC00397-202ENST00000606785 DDX60Q8IY21 1712 aaKnown RBP2.7□□□□□ -1.98
LINC00397-202ENST00000606785 DSCAMO60469 2012 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 DEPDC5O75140 1603 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 IGLV3-32A0A0A0MS00 114 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 F8WEM9 126 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 MGST1P10620 155 aaKnown RBP2.69□□□□□ -1.98
LINC00397-202ENST00000606785 MIFP14174 115 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms