RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
CTSA-213ENST00000606782 COX19Q49B96 90 aa8.98□□□□□ -0.97
CTSA-213ENST00000606782 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
CTSA-213ENST00000606782 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
CTSA-213ENST00000606782 S100A1P23297 94 aa8.97□□□□□ -0.97
CTSA-213ENST00000606782 RPL39LQ96EH5 51 aaKnown RBP8.97□□□□□ -0.97
CTSA-213ENST00000606782 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
CTSA-213ENST00000606782 IBA57-AS1B1ANH7 110 aa8.96□□□□□ -0.98
CTSA-213ENST00000606782 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
CTSA-213ENST00000606782 PPP1R17O96001 155 aa8.96□□□□□ -0.98
CTSA-213ENST00000606782 PPBPP02775 128 aa8.96□□□□□ -0.98
CTSA-213ENST00000606782 CKS2P33552 79 aa8.96□□□□□ -0.98
CTSA-213ENST00000606782 DAZ4Q86SG3 579 aaKnown RBP8.96□□□□□ -0.98
CTSA-213ENST00000606782 NRACQ8N912 160 aa8.96□□□□□ -0.98
CTSA-213ENST00000606782 DAZ3Q9NR90 486 aaKnown RBP8.96□□□□□ -0.98
CTSA-213ENST00000606782 TRAV8-6A0A0B4J262 113 aa8.95□□□□□ -0.98
CTSA-213ENST00000606782 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
CTSA-213ENST00000606782 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
CTSA-213ENST00000606782 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
CTSA-213ENST00000606782 XGP55808 180 aa8.95□□□□□ -0.98
CTSA-213ENST00000606782 LELP1Q5T871 98 aa8.95□□□□□ -0.98
CTSA-213ENST00000606782 CBLN2Q8IUK8 224 aa8.95□□□□□ -0.98
CTSA-213ENST00000606782 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 D6R8Y8 96 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 PHOX2AO14813 284 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 NCR2O95944 276 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 HLA-DQA1P01909 254 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 APCSP02743 223 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 FUSP35637 526 aaKnown RBP eCLIP8.94□□□□□ -0.98
CTSA-213ENST00000606782 OR10J3Q5JRS4 329 aa8.94□□□□□ -0.98
CTSA-213ENST00000606782 SDHAF1A6NFY7 115 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 COLCA2A8K830 154 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 PRSS47A8MTI9 375 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 MT-ND6P03923 174 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 ORMDL3Q8N138 153 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 C20orf78Q9BR46 151 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
CTSA-213ENST00000606782 SCO1O75880 301 aa8.92□□□□□ -0.98
CTSA-213ENST00000606782 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
CTSA-213ENST00000606782 RPL32P62910 135 aaKnown RBP8.92□□□□□ -0.98
CTSA-213ENST00000606782 TMEM97Q5BJF2 176 aa8.92□□□□□ -0.98
CTSA-213ENST00000606782 NTM-AS1Q6ZSK4 140 aa8.92□□□□□ -0.98
CTSA-213ENST00000606782 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.92□□□□□ -0.98
CTSA-213ENST00000606782 PRELID3AQ96N28 172 aa8.92□□□□□ -0.98
CTSA-213ENST00000606782 TMEM70Q9BUB7 260 aa8.92□□□□□ -0.98
CTSA-213ENST00000606782 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 TRBV27A0A0K0K1C4 114 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 VCYO14598 125 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 NPYP01303 97 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 SUMO2P61956 95 aaKnown RBP8.91□□□□□ -0.98
CTSA-213ENST00000606782 LAGE3Q14657 143 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 KIAA1644Q3SXP7 199 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
CTSA-213ENST00000606782 MRPL18Q9H0U6 180 aaKnown RBP8.91□□□□□ -0.98
CTSA-213ENST00000606782 LAMTOR2Q9Y2Q5 125 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 TRAPPC1Q9Y5R8 145 aa8.91□□□□□ -0.98
CTSA-213ENST00000606782 EPM2AB3EWF7 344 aa8.9□□□□□ -0.98
CTSA-213ENST00000606782 I3L3M4 83 aa8.9□□□□□ -0.98
CTSA-213ENST00000606782 PMCHP20382 165 aa8.9□□□□□ -0.98
CTSA-213ENST00000606782 GCSHP23434 173 aa8.9□□□□□ -0.98
CTSA-213ENST00000606782 FABP9Q0Z7S8 132 aa8.9□□□□□ -0.98
CTSA-213ENST00000606782 ALKBH7Q9BT30 221 aaPredicted RBP8.89□□□□□ -0.99
CTSA-213ENST00000606782 PSCAO43653 123 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 IGHV3-30P01768 117 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 IGHV3-30-3P0DP02 117 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 IGHV3-30-5P0DP03 117 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 COTL1Q14019 142 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 IQCJQ1A5X6 159 aa8.88□□□□□ -0.99
CTSA-213ENST00000606782 IGHV1-24A0A0C4DH33 117 aa8.87□□□□□ -0.99
CTSA-213ENST00000606782 TSHBP01222 138 aa8.87□□□□□ -0.99
CTSA-213ENST00000606782 Q8N814 137 aa8.87□□□□□ -0.99
CTSA-213ENST00000606782 DEFB104AQ8WTQ1 72 aa8.87□□□□□ -0.99
CTSA-213ENST00000606782 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
CTSA-213ENST00000606782 Q9HAA7 133 aa8.87□□□□□ -0.99
CTSA-213ENST00000606782 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
CTSA-213ENST00000606782 IGLV5-52A0A0A0MRZ9 124 aa8.86□□□□□ -0.99
CTSA-213ENST00000606782 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
CTSA-213ENST00000606782 RAB5AP20339 215 aa8.86□□□□□ -0.99
CTSA-213ENST00000606782 NIT1Q86X76 327 aa8.86□□□□□ -0.99
CTSA-213ENST00000606782 SMIM2Q9BVW6 85 aa8.86□□□□□ -0.99
CTSA-213ENST00000606782 DMBT1Q9UGM3 2413 aaPredicted RBP8.85□□□□□ -0.99
CTSA-213ENST00000606782 VPS13BQ7Z7G8 4022 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 ESDP10768 282 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 Q8N3U1 123 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 KIR2DL4Q99706 377 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 CHCHD7Q9BUK0 85 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 MAP1LC3AQ9H492 121 aa8.85□□□□□ -0.99
CTSA-213ENST00000606782 TCAPO15273 167 aa8.84□□□□□ -0.99
CTSA-213ENST00000606782 TRGC2P03986 189 aa8.84□□□□□ -0.99
CTSA-213ENST00000606782 AMTP48728 403 aa8.84□□□□□ -0.99
CTSA-213ENST00000606782 Q8N8P6 123 aa8.84□□□□□ -0.99
CTSA-213ENST00000606782 TMEM243Q9BU79 118 aa8.84□□□□□ -0.99
CTSA-213ENST00000606782 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
CTSA-213ENST00000606782 H7C423 109 aa8.83□□□□□ -1
CTSA-213ENST00000606782 IFI27P40305 119 aaPredicted RBP8.83□□□□□ -1
CTSA-213ENST00000606782 Q5VSD8 79 aa8.83□□□□□ -1
CTSA-213ENST00000606782 CHCHD5Q9BSY4 110 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms